RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 CFAP77Q6ZQR2 320 aa11.22□□□□□ -0.61
RNF4-222ENST00000541204 OR6K3Q8NGY3 331 aa11.22□□□□□ -0.61
RNF4-222ENST00000541204 SEH1LQ96EE3 360 aa11.22□□□□□ -0.61
RNF4-222ENST00000541204 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
RNF4-222ENST00000541204 AKIRIN1Q9H9L7 192 aaPredicted RBP11.22□□□□□ -0.61
RNF4-222ENST00000541204 CGGBP1Q9UFW8 167 aaPredicted RBP11.22□□□□□ -0.61
RNF4-222ENST00000541204 B9D1Q9UPM9 204 aa11.22□□□□□ -0.61
RNF4-222ENST00000541204 DHDHQ9UQ10 334 aa11.22□□□□□ -0.61
RNF4-222ENST00000541204 PI4KAP42356 2102 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 TMED7-TICAM2A0A0A6YYA0 188 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 TMEM82A0PJX8 343 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 SHISA8B8ZZ34 492 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 SIGLEC5O15389 551 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 SLC16A7O60669 478 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 RAB3DO95716 219 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 PGCP20142 388 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 IL11P20809 199 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 ACHEP22303 614 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 CFPP27918 469 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 SLC6A8P48029 635 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 SIGLEC14Q08ET2 396 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 GLYATL3Q5SZD4 288 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 TMEM225Q6GV28 225 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 FAM166AQ6J272 317 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 TMEM71Q6P5X7 295 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 TFAP2EQ6VUC0 442 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 ZNF679Q8IYX0 411 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 METTL21AQ8WXB1 218 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 FBXO4Q9UKT5 387 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 VDAC3Q9Y277 283 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 TMED7Q9Y3B3 224 aa11.21□□□□□ -0.61
RNF4-222ENST00000541204 RFPL4AA6NLU0 287 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 D6RAR5 112 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 RFPL4AL1F8VTS6 287 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 H3BUI4 141 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 ALOX12BO75342 701 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 AQP8O94778 261 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 OR6A2O95222 327 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 HPP00738 406 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 OPN1LWP04000 364 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 EPHA8P29322 1005 aaPredicted RBP11.21□□□□□ -0.62
RNF4-222ENST00000541204 TAS2R19P59542 299 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 ACTBP60709 375 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 ACTG1P63261 375 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 ZNF273Q14593 569 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 NR0B2Q15466 257 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 HLA-BQ31612 363 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 HSD17B13Q7Z5P4 300 aaPredicted RBP11.21□□□□□ -0.62
RNF4-222ENST00000541204 ZNF546Q86UE3 836 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 C12orf45Q8N5I9 185 aaPredicted RBP11.21□□□□□ -0.62
RNF4-222ENST00000541204 MAFAQ8NHW3 353 aaPredicted RBP11.21□□□□□ -0.62
RNF4-222ENST00000541204 GPR119Q8TDV5 335 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 ASB5Q8WWX0 329 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 SLC25A28Q96A46 364 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 C1orf198Q9H425 327 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 ZC4H2Q9NQZ6 224 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 MRPL22Q9NWU5 206 aaKnown RBP11.21□□□□□ -0.62
RNF4-222ENST00000541204 TAS2R4Q9NYW5 299 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 ZDBF2Q9HCK1 2354 aa11.21□□□□□ -0.62
RNF4-222ENST00000541204 DCDC2BA2VCK2 349 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 TSPAN9O75954 239 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 PMS2P2O95744 297 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 BGLAPP02818 100 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 AMY2AP04746 511 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 HTR2CP28335 458 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 ADAM8P78325 824 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 ZMYND11Q15326 602 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 ACKR1Q16570 336 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 TEX30Q5JUR7 227 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 PHF19Q5T6S3 580 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 LCN10Q6JVE6 187 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 RHBDD2Q6NTF9 364 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 FDX2Q6P4F2 183 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 C17orf107Q6ZR85 190 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 STEAP2Q8NFT2 490 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 OR1J2Q8NGS2 313 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 ALX4Q9H161 411 aaPredicted RBP11.2□□□□□ -0.62
RNF4-222ENST00000541204 FARSAQ9Y285 508 aaKnown RBP11.2□□□□□ -0.62
RNF4-222ENST00000541204 MRPS18BQ9Y676 258 aaKnown RBP11.2□□□□□ -0.62
RNF4-222ENST00000541204 TRAV36DV7A0A075B6V5 113 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 TMEM265A0A087WTH1 108 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 PRSS37A4D1T9 235 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 HSPB2A8KAH6 182 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 CSN2P05814 226 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 PNLIPRP2P54317 469 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 INSM1Q01101 510 aaPredicted RBP11.2□□□□□ -0.62
RNF4-222ENST00000541204 SQSTM1Q13501 440 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 HSPB2Q16082 182 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 SCGB2B2Q4G0G5 96 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 OR10K2Q6IF99 312 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 SLC18B1Q6NT16 456 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 ATRAIDQ6UW56 229 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 ANKRD37Q7Z713 158 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 CARFQ8N187 725 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 BEST3Q8N1M1 668 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 APCDD1LQ8NCL9 501 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 OR52H1Q8NGJ2 320 aa11.2□□□□□ -0.62
RNF4-222ENST00000541204 OR51A2Q8NGJ7 313 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms