RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ZNF175Q9Y473 711 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 HRH3Q9Y5N1 445 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 IGHV1OR21-1A0A087WYE8 117 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 TMED7-TICAM2A0A0A6YYA0 188 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 IGHV3-20A0A0C4DH32 117 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 CENPVL1A0A0U1RR11 272 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 A6NLC8 198 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 CDC42EP2O14613 210 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 LAMTOR5O43504 91 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 EPPINO95925 133 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 IDH3GP51553 393 aaPredicted RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 BIDP55957 195 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ST3GAL2Q16842 350 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ADAM5Q6NVV9 412 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 PAPD4Q6PIY7 484 aaKnown RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 STAC2Q6ZMT1 411 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 OR2AK2Q8NG84 335 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 IL1F10Q8WWZ1 152 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 C20orf24Q9BUV8 137 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 RSPO3Q9BXY4 272 aaPredicted RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 LRFN1Q9P244 771 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 TMED7Q9Y3B3 224 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ETV7Q9Y603 341 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 BLACEA4D250 179 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 OR5H14A6NHG9 310 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 G3V3Y1 287 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 PYCARD-AS1I3L0S3 204 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 PLA2G10O15496 165 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 CBX7O95931 251 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 GLB1P16278 677 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ALDH3B1P43353 468 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 EPHA4P54764 986 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 HSD17B7P56937 341 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 PMPCAQ10713 525 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 RBM39Q14498 530 aaKnown RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 TMEM81Q6P7N7 255 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 NUDCD2Q8WVJ2 157 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 MARC2Q969Z3 335 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 LCORQ96JN0 433 aaPredicted RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ARPC5LQ9BPX5 153 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 C1QTNF6Q9BXI9 259 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 OR11A1Q9GZK7 315 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF768Q9H5H4 540 aaKnown RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 NARFLQ9H6Q4 476 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 LDAHQ9H6V9 325 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 TAS2R4Q9NYW5 299 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 NTMQ9P121 344 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ABI3Q9P2A4 366 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 SMCO3A2RU48 225 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 OR6C65A6NJZ3 312 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 HRKO00198 91 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ARL6IP1Q15041 203 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF79Q15937 498 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 IAH1Q2TAA2 248 aaPredicted RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 C2orf76Q3KRA6 126 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 C9orf135Q5VTT2 229 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 LYPD8Q6UX82 237 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 OR6M1Q8NGM8 313 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 RNF141Q8WVD5 230 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 SMIM4Q8WVI0 70 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 RADILQ96JH8 1075 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 MIXL1Q9H2W2 232 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 MRPS28Q9Y2Q9 187 aaKnown RBP9.04□□□□□ -0.96
TRAF1-202ENST00000540010 V9GYH0 126 aa9.04□□□□□ -0.96
TRAF1-202ENST00000540010 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 CXCL3P19876 107 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 CX3CR1P49238 355 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 RPS18P62269 152 aaKnown RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 ACSM1Q08AH1 577 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 AANATQ16613 207 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 C1QTNF12Q5T7M4 302 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 MAMSTRQ6ZN01 415 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 OR14L1PQ8NHC6 308 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 NINJ1Q92982 152 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 TRMT61AQ96FX7 289 aaKnown RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 SUSD2Q9UGT4 822 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 KCNG2Q9UJ96 466 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 OR52A1Q9UKL2 312 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 A0A1B0GTH9 108 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 D6RAR5 112 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 RFX2P48378 723 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 CSNK1A1P48729 337 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 PLA2G7Q13093 441 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 FHL5Q5TD97 284 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 BATF2Q8N1L9 274 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 MORN4Q8NDC4 146 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 OR4C16Q8NGL9 310 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 CCDC74AQ96AQ1 378 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 DUSP15Q9H1R2 295 aaPredicted RBP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRAF1-202ENST00000540010 FGF21Q9NSA1 209 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 EMC3Q9P0I2 261 aa9.03□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF223Q9UK11 482 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms