RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 H0Y8X5 98 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ETV2O00321 342 aaPredicted RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 SAP18O00422 153 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 CLDN4O14493 209 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 PPP1R2P9O14990 202 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SIGLEC5O15389 551 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 TMPRSS11DO60235 418 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 PIP5K1CO60331 668 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 MOSPD3O75425 235 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 MED6O75586 246 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZFPL1O95159 310 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 GJB5O95377 273 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 FGF19O95750 216 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 TBX6O95947 436 aaPredicted RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 CSTBP04080 98 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 MRPL3P09001 348 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 LINC00614P0C842 121 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 CTSAP10619 480 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 MYOGP15173 224 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 CBR1P16152 277 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ADRA2CP18825 462 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 FGF7P21781 194 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 GABRR1P24046 479 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 FCARP24071 287 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 CRABP1P29762 137 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SNCAP37840 140 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SULT1A1P50225 295 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 AKR1C2P52895 323 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ADPRHP54922 357 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 PRPS1P60891 318 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 NUTF2P61970 127 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 SRSF3P84103 164 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 AKR1C1Q04828 323 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SIGLEC14Q08ET2 396 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ELAVL1Q15717 326 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 TOMM34Q15785 309 aaPredicted RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 ZIC1Q15915 447 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 MOGAT2Q3SYC2 334 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 CCSMST1Q4G0I0 132 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 AWAT1Q58HT5 328 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 TMEM128Q5BJH2 165 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 EMC4Q5J8M3 183 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 C9orf152Q5JTZ5 239 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 C9orf64Q5T6V5 341 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 TMEM268Q5VZI3 342 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 FAAP20Q6NZ36 180 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SLC48A1Q6P1K1 146 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF585AQ6P3V2 769 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 TMEM220Q6QAJ8 160 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SLC39A5Q6ZMH5 540 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ETV3LQ6ZN32 361 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF836Q6ZNA1 936 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 DPPA4Q7L190 304 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SSX6Q7RTT6 188 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF584Q8IVC4 421 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF610Q8N9Z0 462 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 UBAC2Q8NBM4 344 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 HSD17B11Q8NBQ5 300 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 CHST14Q8NCH0 376 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 RCBTB1Q8NDN9 531 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 OR7G2Q8NG99 324 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 OR4E2Q8NGC2 313 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 OR13C8Q8NGS7 320 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 HMGB4Q8WW32 186 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ASB5Q8WWX0 329 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 MAFIPQ8WZ33 124 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SMARCD2Q92925 531 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 FAM3DQ96BQ1 224 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 S100PBPQ96BU1 408 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF707Q96C28 371 aaPredicted RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 C2orf50Q96LR7 162 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 PDCD1LG2Q9BQ51 273 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 NDUFAF3Q9BU61 184 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 RAB11FIP5Q9BXF6 653 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 MRPL37Q9BZE1 423 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 ACTR3CQ9C0K3 210 aaPredicted RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 SLC5A7Q9GZV3 580 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF350Q9GZX5 532 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SLC35B3Q9H1N7 401 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 HIPK2Q9H2X6 1198 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 HRH4Q9H3N8 390 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 PLEKHA2Q9HB19 425 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 LHX9Q9NQ69 397 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 RXFP3Q9NSD7 469 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 TMEM242Q9NWH2 141 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 LUZP4Q9P127 313 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 FBLN5Q9UBX5 448 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SUSD2Q9UGT4 822 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SLC25A13Q9UJS0 675 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 CES1P1Q9UKY3 287 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SH2B3Q9UQQ2 575 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ATG4BQ9Y4P1 393 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 CSAG2Q9Y5P2 127 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF780BQ9Y6R6 833 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 TRPM6Q9BX84 2022 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 SPTBP11277 2137 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 ARID1BQ8NFD5 2236 aaPredicted RBP6.01□□□□□ -1.45
USP28-207ENST00000538475 CCDC187A0A096LP49 1063 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PPH5 198 aa6.01□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PPK0 400 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms