RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 TOMM20Q15388 145 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 LINC00303Q3SY05 128 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 TMEM244Q5VVB8 128 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 OR2Y1Q8NGV0 311 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 LILRB4Q8NHJ6 448 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 ZBTB8AQ96BR9 441 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 BEX1Q9HBH7 125 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 PROK2Q9HC23 129 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
LIMK1-208ENST00000538333 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 RHBDD3Q9Y3P4 386 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 A0A1B0GUH1 482 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 MEGF11A6BM72 1044 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 C9J4A7 227 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 EIF1AYO14602 144 aaKnown RBP12.46□□□□□ -0.41
LIMK1-208ENST00000538333 TTRP02766 147 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 KLK2P20151 261 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 S100A1P23297 94 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 FKBP2P26885 142 aaKnown RBP12.46□□□□□ -0.41
LIMK1-208ENST00000538333 SFTPDP35247 375 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 ZP1P60852 638 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 MFAP5Q13361 173 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-208ENST00000538333 GLYATL3Q5SZD4 288 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 SLC25A47Q6Q0C1 308 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 OPN5Q6U736 354 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 GPAT4Q86UL3 456 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-208ENST00000538333 OR10H5Q8NGA6 315 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 OR6M1Q8NGM8 313 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 OR6X1Q8NH79 312 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 M1APQ8TC57 530 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 OXGR1Q96P68 337 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 OR10A4Q9H209 315 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 C1orf198Q9H425 327 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 SH2D2AQ9NP31 389 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
LIMK1-208ENST00000538333 LHFPL6Q9Y693 200 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 TECTAO75443 2155 aa12.46□□□□□ -0.41
LIMK1-208ENST00000538333 MEIKINA0A087WXM9 373 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 LOC102725191A0A1B0GVB3 256 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 AQP7P3A6NL99 342 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 P2RY10O00398 339 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 ARPC1BO15143 372 aaKnown RBP12.46□□□□□ -0.42
LIMK1-208ENST00000538333 LDLRAD4O15165 306 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 ICMTO60725 284 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 RBBP9O75884 186 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 ACSM4P0C7M7 580 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 CCL3P10147 92 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 DNASE1L1P49184 302 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 MECP2P51608 486 aaKnown RBP12.46□□□□□ -0.42
LIMK1-208ENST00000538333 CLRN1P58418 232 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 SNRPD2P62316 118 aaKnown RBP12.46□□□□□ -0.42
LIMK1-208ENST00000538333 HIST3H3Q16695 136 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 CFAP77Q6ZQR2 320 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 GTPBP8Q8N3Z3 284 aaPredicted RBP12.46□□□□□ -0.42
LIMK1-208ENST00000538333 ANGPTL4Q9BY76 406 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 NOX3Q9HBY0 568 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 GDF2Q9UK05 429 aaPredicted RBP12.46□□□□□ -0.42
LIMK1-208ENST00000538333 HSPB11Q9Y547 144 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 NPTNQ9Y639 398 aa12.46□□□□□ -0.42
LIMK1-208ENST00000538333 TRAV18A0A075B6X5 111 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 A0A087WZY1 265 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 NDUFB6O95139 128 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 EIF1AXP47813 144 aaKnown RBP12.45□□□□□ -0.42
LIMK1-208ENST00000538333 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 SPOCK1Q08629 439 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 PCGF3Q3KNV8 242 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 C1orf100Q5SVJ3 147 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 Q6ZTK2 550 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 ELMOD2Q8IZ81 293 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 OR11H4Q8NGC9 324 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 RANBP3Q9H6Z4 567 aaPredicted RBP12.45□□□□□ -0.42
LIMK1-208ENST00000538333 ING4Q9UNL4 249 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 A0A1B0GVI7 797 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 A0A1W2PPL8 197 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 DCDC2BA2VCK2 349 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 GABRA1P14867 456 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 H3F3AP84243 136 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 TMPPEQ6ZT21 453 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 HDDC2Q7Z4H3 204 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 GRPEL2Q8TAA5 225 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 PAQR8Q8TEZ7 354 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 PBOV1Q9GZY1 135 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
LIMK1-208ENST00000538333 TAS2R8Q9NYW2 309 aa12.45□□□□□ -0.42
LIMK1-208ENST00000538333 SULT2B1O00204 365 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 SSNA1O43805 119 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 ZNF43P17038 809 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 CDAP32320 146 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 RAD52P43351 418 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 SLC35A1P78382 337 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 GLDNQ6ZMI3 551 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-208ENST00000538333 ADGRE4PQ86SQ3 457 aa12.44□□□□□ -0.42
LIMK1-208ENST00000538333 ARMC10Q8N2F6 343 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms