RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TPTEP56180 551 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 DEFA1P59665 94 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 DEFA3P59666 94 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PRPS1P60891 318 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ISL1P61371 349 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 CSNK2BP67870 215 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 TUBA1BP68363 451 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SIRPAP78324 504 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SLC35A2P78381 396 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 H3F3AP84243 136 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 POU3F1Q03052 451 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 EMX1Q04741 257 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PRKCDQ05655 676 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 RPL18Q07020 188 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SEC23BQ15437 767 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 MICAQ29983 383 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 IQCCQ4KMZ1 466 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SYT6Q5T7P8 510 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 TMEM236Q5W0B7 351 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ABLIM2Q6H8Q1 611 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 LAIR2Q6ISS4 152 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 RPL13AP3Q6NVV1 102 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 XKRXQ6PP77 449 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PLXDC2Q6UX71 529 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 CASP12Q6UXS9 341 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 TMPRSS11FQ6ZWK6 438 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 USP43Q70EL4 1123 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 TUBA1AQ71U36 451 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PXKQ7Z7A4 578 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 GALNT5Q7Z7M9 940 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 UEVLDQ8IX04 471 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF100Q8IYN0 542 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 UBE2J2Q8N2K1 259 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 RPRMLQ8N4K4 120 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 LRRC17Q8N6Y2 441 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 TMEM99Q8N816 258 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ATG16L2Q8NAA4 619 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 C9orf106Q8NAJ2 232 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 AQP11Q8NBQ7 271 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ADPRHL1Q8NDY3 354 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OR10G2Q8NGC3 310 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OR9K2Q8NGE7 335 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OR52L1Q8NGH7 329 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OR13C2Q8NGS9 318 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OR6K3Q8NGY3 331 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OR51A7Q8NH64 312 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 MCFD2Q8NI22 146 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 CNIH3Q8TBE1 160 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 FANK1Q8TC84 345 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 C17orf50Q8WW18 174 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ASB5Q8WWX0 329 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SGCDQ92629 289 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 APH1AQ96BI3 265 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 R3HDM4Q96D70 268 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OXGR1Q96P68 337 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PITX2Q99697 317 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 DPCDQ9BVM2 203 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SF3B5Q9BWJ5 86 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 MMP27Q9H306 513 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PIGMQ9H3S5 423 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 FANCFQ9NPI8 374 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PDP1Q9P0J1 537 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ERVK-18Q9QC07 812 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF629Q9UEG4 869 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ENOPH1Q9UHY7 261 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 CLEC4AQ9UMR7 237 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 NOSIPQ9Y314 301 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 GMPPBQ9Y5P6 360 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ESPL1Q14674 2120 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 MPDZO75970 2070 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ZFYVE26Q68DK2 2539 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ARHGAP21Q5T5U3 1957 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 KIAA1549Q9HCM3 1950 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ITPR1Q14643 2758 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 IGSF10Q6WRI0 2623 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ZZEF1O43149 2961 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 PHF3Q92576 2039 aaKnown RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TRAV27A0A087WT01 109 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 PNMA8CA0A1B0GUJ8 204 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 LOC102725191A0A1B0GVB3 256 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 OR6C65A6NJZ3 312 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF726A6NNF4 738 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF716A6NP11 495 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 KDM4EB2RXH2 506 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF814B7Z6K7 855 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 LRRN3E7EW58 273 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 PTGES3LE9PB15 166 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 H3BN98 237 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 XKRYO14609 159 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 CDC42EP2O14613 210 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 XPNPEP2O43895 674 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 RAMP1O60894 148 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 TOXO94900 526 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 NDUFB2O95178 105 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ADAP00813 363 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 APOA1P02647 267 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 ANXA8P13928 327 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 POU2F1P14859 743 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 CD36P16671 472 aa3.79□□□□□ -1.8
SNHG1-208ENST00000538266 KLK2P20151 261 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms