RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 UBE2R2Q712K3 238 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 GLT6D1Q7Z4J2 308 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LHFPL4Q7Z7J7 247 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 APCDD1Q8J025 514 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CFAP52Q8N1V2 620 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LINC00471Q8N535 108 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ARRDC2Q8TBH0 407 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 NUDT11Q96G61 164 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ADAD1Q96M93 576 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 SYT3Q9BQG1 590 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FNDC11Q9BVV2 318 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CWH43Q9H720 699 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 GPR173Q9NS66 373 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TMEM100Q9NV29 134 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ZNF282Q9UDV7 671 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 TCF20Q9UGU0 1960 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 ANKUB1A6NFN9 424 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CASTOR2A6NHX0 329 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MFNGO00587 321 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GAPDHSO14556 408 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 PIN1P1O15428 100 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GSTZ1O43708 216 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 GMFGO60234 142 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CIDEAO60543 219 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 LEFTY1O75610 366 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CRTAPO75718 401 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 SLC25A14O95258 325 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 KLF8O95600 359 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 IL2RAP01589 272 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MAS1P04201 325 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 AKR1C4P17516 323 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PI3P19957 117 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PPP2R1BP30154 601 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CHRNB4P30926 498 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 LTBRP36941 435 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CD96P40200 585 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NAA10P41227 235 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 RAB7AP51149 207 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MLF1P58340 268 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ACTA2P62736 377 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ACTG2P63267 376 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ACTC1P68032 377 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ACTA1P68133 377 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 RAE1P78406 368 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 SLC7A9P82251 487 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 HYAL1Q12794 435 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MMDQ15546 238 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 C1orf94Q6P1W5 598 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 FBXO42Q6P3S6 717 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 METTL7BQ6UX53 244 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 FAM151BQ6UXP7 276 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZNF100Q8IYN0 542 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NECAP1Q8NC96 275 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ADAD2Q8NCV1 583 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 BEND2Q8NDZ0 799 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 OR4K17Q8NGC6 315 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 OR6T1Q8NGN1 323 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 FIBINQ8TAL6 211 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SLC38A5Q8WUX1 472 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 XAGE5Q8WWM1 108 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ASB17Q8WXJ9 295 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MUCL1Q96DR8 90 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TMEM19Q96HH6 336 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PGLYRP3Q96LB9 341 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 SAMD8Q96LT4 415 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 YPEL4Q96NS1 127 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ALKBH7Q9BT30 221 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 TWSG1Q9GZX9 223 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 OR52A5Q9H2C5 316 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CSNK1G1Q9HCP0 422 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ASB6Q9NWX5 421 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CLEC5AQ9NY25 188 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NUDT4Q9NZJ9 180 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NCDNQ9UBB6 729 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 OR5V1Q9UGF6 321 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 DKKL1Q9UK85 242 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MRPS33Q9Y291 106 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 POLR3KQ9Y2Y1 108 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 MYO9BQ13459 2157 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TRAV18A0A075B6X5 111 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 A0A087WUU8 490 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 TEX13DA0A0J9YY54 714 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZNF705FA8MVS1 300 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 GRXCR1A8MXD5 290 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 STK16O75716 305 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 NDUFB8O95169 186 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 CD55P08174 381 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZNF705DP0CH99 300 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 ZNF705BP0CI00 300 aaPredicted RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 PNLIPP16233 465 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PPP1CCP36873 323 aaKnown RBP3.35□□□□□ -1.87
MCF2-210ENST00000536274 CLDN2P57739 230 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PPP2CBP62714 309 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PPP2CAP67775 309 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 C17orf67Q0P5P2 114 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 MTAPQ13126 283 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PPP1R1AQ13522 171 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 PMS2P11Q13670 270 aa3.35□□□□□ -1.87
MCF2-210ENST00000536274 GUK1Q16774 197 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms