RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 OR2H1Q9GZK4 316 aa14.3□□□□□ -0.12
PKP3-209ENST00000533069 RIBC2Q9H4K1 309 aa14.3□□□□□ -0.12
PKP3-209ENST00000533069 POLE4Q9NR33 117 aa14.3□□□□□ -0.12
PKP3-209ENST00000533069 DUSP13Q9UII6 198 aa14.3□□□□□ -0.12
PKP3-209ENST00000533069 HEATR1Q9H583 2144 aaKnown RBP14.3□□□□□ -0.12
PKP3-209ENST00000533069 FN1P02751 2386 aaKnown RBP14.29□□□□□ -0.12
PKP3-209ENST00000533069 TLN2Q9Y4G6 2542 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 IGLV3-9A0A075B6K5 115 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 LOC100130705A0A1B0GUX0 176 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 DLGAP1O14490 977 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 IDH3BO43837 385 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 MPZL2O60487 215 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 TXNDC12O95881 172 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 LCKP06239 509 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 ZNF250P15622 560 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 GIFP27352 417 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 GDI2P50395 445 aaKnown RBP14.29□□□□□ -0.12
PKP3-209ENST00000533069 KLF3P57682 345 aaPredicted RBP14.29□□□□□ -0.12
PKP3-209ENST00000533069 FXYD6P3P58550 94 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 CDC42P60953 191 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 ADARB1P78563 741 aaKnown RBP14.29□□□□□ -0.12
PKP3-209ENST00000533069 SLC27A4Q6P1M0 643 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 THSD4Q6ZMP0 1018 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 LRP11Q86VZ4 500 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 ZCCHC24Q8N2G6 241 aaKnown RBP14.29□□□□□ -0.12
PKP3-209ENST00000533069 ZNF786Q8N393 782 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 OR2T33Q8NG76 320 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 AKR7LQ8NHP1 331 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 SYNPRQ8TBG9 265 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 RASD2Q96D21 266 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 POM121L2Q96KW2 1035 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 FOXN4Q96NZ1 517 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 PITX2Q99697 317 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 GPA33Q99795 319 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 ZNF416Q9BWM5 594 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 ANKRD60Q9BZ19 345 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 WNT5BQ9H1J7 359 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 OR52D1Q9H346 318 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 TPK1Q9H3S4 243 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 SLC25A19Q9HC21 320 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 TBC1D23Q9NUY8 699 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 FAM118AQ9NWS6 357 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 SLCO1C1Q9NYB5 712 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 VSX1Q9NZR4 365 aaPredicted RBP14.29□□□□□ -0.12
PKP3-209ENST00000533069 EIF3KQ9UBQ5 218 aaKnown RBP14.29□□□□□ -0.12
PKP3-209ENST00000533069 FZR1Q9UM11 496 aa14.29□□□□□ -0.12
PKP3-209ENST00000533069 ZAR1LA6NP61 321 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 IMPA2O14732 288 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 DENRO43583 198 aaKnown RBP14.28□□□□□ -0.12
PKP3-209ENST00000533069 ICMTO60725 284 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 CRLF1O75462 422 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 KHDRBS3O75525 346 aaKnown RBP14.28□□□□□ -0.12
PKP3-209ENST00000533069 HMGN1P05114 100 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 CTLA4P16410 223 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 CCNOP22674 350 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 ALDH3B1P43353 468 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 SCRN3Q0VDG4 424 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 ENDOGQ14249 297 aaKnown RBP14.28□□□□□ -0.12
PKP3-209ENST00000533069 GGTLC2Q14390 218 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 MOGQ16653 247 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 NKPD1Q17RQ9 610 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 CSPG4Q6UVK1 2322 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 UBASH3BQ8TF42 649 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 TRUB1Q8WWH5 349 aaKnown RBP14.28□□□□□ -0.12
PKP3-209ENST00000533069 CYGBQ8WWM9 190 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 MBOAT4Q96T53 435 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 SYT4Q9H2B2 425 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 OR51B6Q9H340 312 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 YAE1D1Q9NRH1 226 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 IL20RAQ9UHF4 553 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 NDRG4Q9ULP0 352 aaKnown RBP14.28□□□□□ -0.12
PKP3-209ENST00000533069 IER3IP1Q9Y5U9 82 aa14.28□□□□□ -0.12
PKP3-209ENST00000533069 LOC100509620A0A075B734 347 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 C5orf49A4QMS7 147 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 A8MV72 311 aaPredicted RBP14.27□□□□□ -0.13
PKP3-209ENST00000533069 E9PQ18 207 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 SLC16A7O60669 478 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 MITFO75030 526 aaPredicted RBP14.27□□□□□ -0.13
PKP3-209ENST00000533069 MT-ND5P03915 603 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 COX5BP10606 129 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 GZMKP49863 264 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 MED21Q13503 144 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 MAD2L1BPQ15013 274 aaPredicted RBP14.27□□□□□ -0.13
PKP3-209ENST00000533069 PTGES3Q15185 160 aaKnown RBP14.27□□□□□ -0.13
PKP3-209ENST00000533069 ZIK1Q3SY52 487 aaPredicted RBP14.27□□□□□ -0.13
PKP3-209ENST00000533069 C6orf52Q5T4I8 152 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 SLX4IPQ5VYV7 408 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 CYB5R2Q6BCY4 276 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 DNM1P34Q6PK57 102 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 ARL9Q6T311 187 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 GLB1L2Q8IW92 636 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 OR1J1Q8NGS3 322 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 SNX33Q8WV41 574 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 BPESC1Q9GZL8 116 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 EMC7Q9NPA0 242 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 MYEF2Q9P2K5 600 aaKnown RBP14.27□□□□□ -0.13
PKP3-209ENST00000533069 GMPPBQ9Y5P6 360 aa14.27□□□□□ -0.13
PKP3-209ENST00000533069 H3BSA7 217 aa14.26□□□□□ -0.13
PKP3-209ENST00000533069 ARPC3O15145 178 aa14.26□□□□□ -0.13
PKP3-209ENST00000533069 PPP1R3DO95685 299 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms