RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 OMPP47874 163 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 HNRNPA0Q13151 305 aaKnown RBP14.21□□□□□ -0.13
CPSF1-207ENST00000531727 HSP90B2PQ58FF3 399 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 FGD3Q5JSP0 725 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 ADCK1Q86TW2 530 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 ZNF283Q8N7M2 679 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 OR2Z1Q8NG97 314 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 FAM216AQ8WUB2 273 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 SLC7A6Q92536 515 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 CMBLQ96DG6 245 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 RSRC1Q96IZ7 334 aaKnown RBP14.21□□□□□ -0.13
CPSF1-207ENST00000531727 JMJD8Q96S16 334 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 SUCNR1Q9BXA5 334 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 RERGLQ9H628 205 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 C7orf69Q9H7B7 122 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 NDUFAF4Q9P032 175 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 ASH2LQ9UBL3 628 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 OPN4Q9UHM6 478 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 COA3Q9Y2R0 106 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-207ENST00000531727 DYSFO75923 2080 aa14.21□□□□□ -0.14
CPSF1-207ENST00000531727 PPIAL4EA0A075B759 164 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 PPIAL4CA0A0B4J2A2 164 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 OR6C6A6NF89 314 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 PPIAL4DF5H284 164 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 TRIM77I1YAP6 450 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 SOCS2O14508 198 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 IMPA2O14732 288 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 FOXH1O75593 365 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 FSHBP01225 129 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 SBK2P0C263 348 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 PPIAL4FP0DN26 164 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 TNFRSF1AP19438 455 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 CFPP27918 469 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 FXYD6P3P58550 94 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 PSME3P61289 254 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 ACTG1P63261 375 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 OTPQ5XKR4 325 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 DPY19L2P2Q6ZN68 376 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 OR1F12Q8NHA8 337 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 HAVCR1Q96D42 359 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 C7orf34Q96L11 122 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 DCLRE1CQ96SD1 692 aaKnown RBP14.2□□□□□ -0.14
CPSF1-207ENST00000531727 SLC6A7Q99884 636 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 KRCC1Q9NPI7 259 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-207ENST00000531727 IL19Q9UHD0 177 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 EGFL7Q9UHF1 273 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 IL20RAQ9UHF4 553 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 ATPIF1Q9UII2 106 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 IER3IP1Q9Y5U9 82 aa14.2□□□□□ -0.14
CPSF1-207ENST00000531727 TRBV4-1A0A0J9YWV2 114 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 J3QW42 95 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 SURF4O15260 269 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 TXNDC12O95881 172 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 ZFP36P26651 326 aaKnown RBP14.19□□□□□ -0.14
CPSF1-207ENST00000531727 COMPP49747 757 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-207ENST00000531727 SEC23BQ15437 767 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 KCNMB1Q16558 191 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 TMEM155Q4W5P6 130 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 CCDC92Q53HC0 331 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-207ENST00000531727 GLYATQ6IB77 296 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 C1orf94Q6P1W5 598 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 PTCHD4Q6ZW05 846 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 BPIFB2Q8N4F0 458 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 SPICQ8N5J4 248 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 ITLN1Q8WWA0 313 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 PTP4A1Q93096 173 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 CMTM5Q96DZ9 223 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 DHRS1Q96LJ7 313 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 RBM4Q9BWF3 364 aaKnown RBP14.19□□□□□ -0.14
CPSF1-207ENST00000531727 NUAK2Q9H093 628 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 DCAF13Q9NV06 445 aaKnown RBP14.19□□□□□ -0.14
CPSF1-207ENST00000531727 SAMD4AQ9UPU9 718 aaKnown RBP14.19□□□□□ -0.14
CPSF1-207ENST00000531727 AURKCQ9UQB9 309 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 PPP1R3CQ9UQK1 317 aa14.19□□□□□ -0.14
CPSF1-207ENST00000531727 UNC119BA6NIH7 251 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 RER1O15258 196 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 RAC2P15153 192 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 RBMXP38159 391 aaKnown RBP14.18□□□□□ -0.14
CPSF1-207ENST00000531727 CDKN2AP42771 156 aaKnown RBP14.18□□□□□ -0.14
CPSF1-207ENST00000531727 RGS6P49758 472 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 ERFP50548 548 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 RPS6KA3P51812 740 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 SMARCD3Q6STE5 483 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 LRRC28Q86X40 367 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-207ENST00000531727 KLHL36Q8N4N3 616 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 FAM86B1Q8N7N1 296 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 SIGLEC11Q96RL6 698 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 FUZQ9BT04 418 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 MYLK2Q9H1R3 596 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 PATZ1Q9HBE1 687 aaKnown RBP14.18□□□□□ -0.14
CPSF1-207ENST00000531727 SPAG4Q9NPE6 437 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 MED4Q9NPJ6 270 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 POLR1DQ9Y2S0 133 aa14.18□□□□□ -0.14
CPSF1-207ENST00000531727 TMEM89A2RUT3 159 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 GMNNO75496 209 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 DIRAS1O95057 198 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 DBHP09172 617 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 SLC6A9P48067 706 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 BTG1P62324 171 aa14.17□□□□□ -0.14
CPSF1-207ENST00000531727 HIST1H3AP68431 136 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms