RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 JCADQ9P266 1359 aa2.73□□□□□ -1.97
PTPRK-220ENST00000531466 KDM5BQ9UGL1 1544 aa2.73□□□□□ -1.97
PTPRK-220ENST00000531466 RIMS1Q86UR5 1692 aaKnown RBP2.73□□□□□ -1.97
PTPRK-220ENST00000531466 KBTBD11-OT1A0A1B0GTJ5 212 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 A0A1B0GVG6 124 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CCDC182A6NF36 153 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 FRG2CA6NGY1 282 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 NKX6-3A6NJ46 265 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CCT8L1PA6NM43 557 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 A8MVM7 634 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 LOC110117498-PIK3R3F6TDL0 507 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CDIPTO14735 213 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SIGLEC5O15389 551 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 NBR2O15453 112 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SGCEO43556 437 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 LATO43561 262 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 KIAA0513O60268 411 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 BANF1O75531 89 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 GRAP2O75791 330 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 B3GAT3O94766 335 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 AQP8O94778 261 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 GLSO94925 669 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 VAMP5O95183 116 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 LYPD3O95274 346 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SYNGR4O95473 234 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 AP2A1O95782 977 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 NBEAP1P0C6P0 100 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 MYL2P10916 166 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ANXA3P12429 323 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 RNH1P13489 461 aaKnown RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PAX6P26367 422 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CD82P27701 267 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PSMB5P28074 263 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 LAP3P28838 519 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CA5AP35218 305 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 BTDP43251 543 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ACOT2P49753 483 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 KPNA2P52292 529 aaKnown RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ACLYP53396 1101 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PLA2G16P53816 162 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 KCNK10P57789 538 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 OR4D2P58180 307 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 LCN2P80188 198 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 OGDHQ02218 1023 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PUDPQ08623 228 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 FUT7Q11130 342 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 BNIP2Q12982 314 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 RAB31Q13636 194 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SYPL1Q16563 259 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 RFX4Q33E94 735 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 TMEM176BQ3YBM2 270 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ACSM3Q53FZ2 586 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PDZD11Q5EBL8 140 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ACER2Q5QJU3 275 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 N4BP2L1Q5TBK1 243 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SDHAF4Q5VUM1 108 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 C9orf84Q5VXU9 1444 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 HIST2H2AA3Q6FI13 130 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 OR4F3Q6IEY1 312 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 FAM45BPQ6NSW5 357 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 FAHD2BQ6P2I3 314 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SLC39A4Q6P5W5 647 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CYHR1Q6ZMK1 362 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SLC16A14Q7RTX9 510 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PEX26Q7Z412 305 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 COX8CQ7Z4L0 72 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 CACUL1Q86Y37 369 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 STHQ8IWL8 128 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 NRMQ8IXM6 262 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PUSL1Q8N0Z8 303 aaKnown RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 STPG2Q8N412 459 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ALLCQ8N6M5 410 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 C8orf31Q8N9H6 132 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 HSD17B11Q8NBQ5 300 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 OR51G2Q8NGK0 314 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 OR1L4Q8NGR5 311 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 FAM45AQ8TCE6 357 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 MAGEE2Q8TD90 523 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ZNF721Q8TF20 911 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 GGHQ92820 318 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 TMEM203Q969S6 136 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 MARC2Q969Z3 335 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 EXOSC8Q96B26 276 aaKnown RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 FAHD2AQ96GK7 314 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 HPDLQ96IR7 371 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 RNF170Q96K19 258 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 GUCD1Q96NT3 240 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 PRAP1Q96NZ9 151 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 MIA2Q96PC5 1412 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 SIGLEC12Q96PQ1 595 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 OR2V2Q96R30 315 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ERGIC2Q96RQ1 377 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 COPS8Q99627 209 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 KLHDC3Q9BQ90 382 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 DPH7Q9BTV6 452 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 BEX2Q9BXY8 128 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 TRIM9Q9C026 710 aa2.72□□□□□ -1.97
PTPRK-220ENST00000531466 NAT10Q9H0A0 1025 aaKnown RBP2.72□□□□□ -1.97
PTPRK-220ENST00000531466 ING2Q9H160 280 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms