RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 NABP1Q96AH0 204 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 TUBGCP3Q96CW5 907 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 SLC25A44Q96H78 314 aaPredicted RBP6.73□□□□□ -1.33
CD44-232ENST00000531118 CLPTM1LQ96KA5 538 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 TEX37Q96LM6 180 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 MAGEB18Q96M61 343 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CCDC115Q96NT0 180 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ZNF347Q96SE7 839 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ZNF607Q96SK3 696 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CITED2Q99967 270 aaPredicted RBP6.73□□□□□ -1.33
CD44-232ENST00000531118 MMADHCQ9H3L0 296 aaPredicted RBP6.73□□□□□ -1.33
CD44-232ENST00000531118 CNTD2Q9H8S5 307 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 ELOVL3Q9HB03 270 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CACYBPQ9HB71 228 aaKnown RBP6.73□□□□□ -1.33
CD44-232ENST00000531118 SMURF1Q9HCE7 757 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 CALML5Q9NZT1 146 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 PSMC3IPQ9P2W1 217 aaPredicted RBP6.73□□□□□ -1.33
CD44-232ENST00000531118 DCDC2Q9UHG0 476 aa6.73□□□□□ -1.33
CD44-232ENST00000531118 IGHV3-64DA0A0J9YX35 117 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 LRRC30A6NM36 301 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 H3BUX3 64 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 ABHD16AO95870 558 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 IGHG1P01857 330 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 FGF4P08620 206 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 ABHD2P08910 425 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
CD44-232ENST00000531118 CDKN2CP42773 168 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 CLRN1P58418 232 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 ERVK-25P63136 954 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 MRPS34P82930 218 aaKnown RBP6.72□□□□□ -1.33
CD44-232ENST00000531118 PSG4Q00888 419 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 MAD2L1Q13257 205 aaPredicted RBP6.72□□□□□ -1.33
CD44-232ENST00000531118 PDCD4Q53EL6 469 aaKnown RBP6.72□□□□□ -1.33
CD44-232ENST00000531118 C10orf128Q5T292 105 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 C8orf74Q6P047 294 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 RNF144BQ7Z419 303 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 C10orf53Q8N6V4 93 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 TRIML2Q8N7C3 387 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 PNLDC1Q8NA58 520 aaKnown RBP6.72□□□□□ -1.33
CD44-232ENST00000531118 C19orf18Q8NEA5 215 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 DNAJA4Q8WW22 397 aaPredicted RBP6.72□□□□□ -1.33
CD44-232ENST00000531118 MCHR2Q969V1 340 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 TESCQ96BS2 214 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 TMEM19Q96HH6 336 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 RCC1LQ96I51 464 aaKnown RBP6.72□□□□□ -1.33
CD44-232ENST00000531118 OR2H1Q9GZK4 316 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 WNT5BQ9H1J7 359 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 KCNN2Q9H2S1 579 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 ARMC7Q9H6L4 198 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 TBK1Q9UHD2 729 aa6.72□□□□□ -1.33
CD44-232ENST00000531118 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 A0A0B4J2E0 115 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 A0A1B0GX12 115 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 SHISA3A0PJX4 238 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 SLC2A10O95528 541 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 PAHP00439 452 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 CDAP32320 146 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 SRP9P49458 86 aaKnown RBP6.71□□□□□ -1.34
CD44-232ENST00000531118 ZNF133P52736 654 aaPredicted RBP6.71□□□□□ -1.34
CD44-232ENST00000531118 MVDP53602 400 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 ARF6P62330 175 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 EMX2Q04743 252 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 LY6EQ16553 131 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 HIST3H3Q16695 136 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 DPY19L1Q2PZI1 675 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 CEP85LQ5SZL2 805 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 XP32Q5T750 250 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 FAM91A1Q658Y4 838 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 CBLL1Q75N03 491 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 IGFN1Q86VF2 1251 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 COMTD1Q86VU5 262 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 OR5AS1Q8N127 324 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 CNPY4Q8N129 248 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 LSMEM1Q8N8F7 131 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 ATG16L2Q8NAA4 619 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 MNS1Q8NEH6 495 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 WIPF2Q8TF74 440 aaPredicted RBP6.71□□□□□ -1.34
CD44-232ENST00000531118 C4orf45Q96LM5 186 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 C16orf45Q96MC5 204 aaPredicted RBP6.71□□□□□ -1.34
CD44-232ENST00000531118 FMO2Q99518 471 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 SIAEQ9HAT2 523 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 SIRT7Q9NRC8 400 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 TBCCD1Q9NVR7 557 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 NKX1-2Q9UD57 310 aaPredicted RBP6.71□□□□□ -1.34
CD44-232ENST00000531118 BTNL2Q9UIR0 455 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 RPUSD1Q9UJJ7 312 aaKnown RBP6.71□□□□□ -1.34
CD44-232ENST00000531118 TMCC3Q9ULS5 477 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 IFT52Q9Y366 437 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 UGT2A1Q9Y4X1 527 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 MAB21L2Q9Y586 359 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 KPTNQ9Y664 436 aa6.71□□□□□ -1.34
CD44-232ENST00000531118 A0A1B0GVI7 797 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 A0A1W2PPM1 405 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 A0A1W2PRD5 423 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 A0A1W2PRF3 423 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 A0A1W2PRM7 423 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 A0A1W2PRX2 142 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 ELOVL7A1L3X0 281 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 CCDC154A6NI56 674 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 E9PBE3 544 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms