RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 CPED1A4D0V7 1026 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 DDTLA6NHG4 134 aaPredicted RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 ANXA2P2A6NMY6 339 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 TEX22C9J3V5 150 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 C9J4A7 227 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 MCRIP1C9JLW8 97 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 PPP5D1E7EU14 171 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 RNASEK-C17orf49H0YIS7 233 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 HAS3O00219 553 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 UBFD1O14562 309 aaKnown RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 PHOX2AO14813 284 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 PPP1R2P9O14990 202 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 GALR3O60755 368 aaPredicted RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 PRDM1O75626 825 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 RAD51DO75771 328 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 HPRT1P00492 218 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 C1QCP02747 245 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ADRA2AP08913 450 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ALPIP09923 528 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 CD79AP11912 226 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ETFAP13804 333 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 GPX2P18283 190 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 DGKAP23743 735 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 AK4P27144 223 aaPredicted RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 CD1CP29017 333 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ARRB2P32121 409 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 BRS3P32247 399 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SSTR5P35346 364 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ARL3P36405 182 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 MAP2K4P45985 399 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 RFX3P48380 749 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 THBS3P49746 956 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 RAB9AP51151 201 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 CLDN12P56749 244 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 RAB11AP62491 216 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 RHOGP84095 191 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ADORA2A-AS1P86434 159 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 EGR4Q05215 589 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 FAM27E3Q08E93 113 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 PRDX4Q13162 271 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SKP2Q13309 424 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ZNF345Q14585 488 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 MAPK14Q16539 360 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 SOWAHAQ2M3V2 549 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SLC36A2Q495M3 483 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 COX19Q49B96 90 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 OCIAD2Q56VL3 154 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 COA6Q5JTJ3 125 aaKnown RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 CBWD3Q5JTY5 395 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 FNBP1LQ5T0N5 605 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 GCNT6Q5T4J0 391 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 C1orf194Q5T5A4 169 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SYPL2Q5VXT5 272 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 NADSYN1Q6IA69 706 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ZNF549Q6P9A3 640 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 WDR74Q6RFH5 385 aaPredicted RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 ZNF562Q6V9R5 426 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SSX6Q7RTT6 188 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 TMEM144Q7Z5S9 345 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 PARGQ86W56 976 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ARHGAP12Q8IWW6 846 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 KLHDC8BQ8IXV7 354 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 CCNYQ8ND76 341 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 OR11H4Q8NGC9 324 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 OR13C4Q8NGS5 318 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SPPL2AQ8TCT8 520 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SLC7A13Q8TCU3 470 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ABHD3Q8WU67 409 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ASB17Q8WXJ9 295 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ARNTL2Q8WYA1 636 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 TMEM18Q96B42 140 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 TADA1Q96BN2 335 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 MARK4Q96L34 752 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 CXorf58Q96LI9 332 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 OR7D2Q96RA2 312 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 OR52E6Q96RD3 313 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 C20orf144Q9BQM9 153 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 TMEM43Q9BTV4 400 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 BARHL1Q9BZE3 327 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 OR8D2Q9GZM6 311 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 ZNF350Q9GZX5 532 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 TMEM117Q9H0C3 514 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 MMP28Q9H239 520 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 OR51J1Q9H342 316 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 FN3KRPQ9HA64 309 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 RHOFQ9HBH0 211 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SIX2Q9NPC8 291 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 UBQLN4Q9NRR5 601 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 HEBP1Q9NRV9 189 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 FGF21Q9NSA1 209 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 FAM212BQ9NTI7 297 aaPredicted RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 LYRM2Q9NU23 88 aaPredicted RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 MARCH5Q9NX47 278 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 SLC25A10Q9UBX3 287 aaPredicted RBP4.98□□□□□ -1.61
CD44-231ENST00000531110 OR14J1Q9UGF5 321 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 MUTYHQ9UIF7 546 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 FAM96BQ9Y3D0 163 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 CMAHPQ9Y471 501 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 NME7Q9Y5B8 376 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms