RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 SLCO1B1Q9Y6L6 691 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 ASXL3Q9C0F0 2248 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 A0A087WUJ7 227 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 CT45A8P0DMV1 189 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 CT45A9P0DMV2 189 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 MUC1P15941 1255 aaPredicted RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 PSMD4P55036 377 aaKnown RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 PPP1R1AQ13522 171 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 ELAVL1Q15717 326 aaKnown RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 CT45A2Q5DJT8 189 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 VWA2Q5GFL6 755 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 PRAMEF17Q5VTA0 474 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 ZNF676Q8N7Q3 588 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 CASTOR1Q8WTX7 329 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 FAM3DQ96BQ1 224 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 RRNAD1Q96FB5 475 aaKnown RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 LMF2Q9BU23 707 aaKnown RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
USP48-213ENST00000529637 CDV3Q9UKY7 258 aaKnown RBP12.78□□□□□ -0.36
USP48-213ENST00000529637 OR4C45A6NMZ5 311 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 EFCAB7A8K855 629 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 PTAFRP25105 342 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 PRKXP51817 358 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 PEA15Q15121 130 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 NKAPLQ5M9Q1 402 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 ASPHD2Q6ICH7 369 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 OR10K2Q6IF99 312 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 CBLN3Q6UW01 205 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 MED25Q71SY5 747 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 KCTD9Q7L273 389 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 TMEM200AQ86VY9 491 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 PRSS35Q8N3Z0 413 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 INO80EQ8NBZ0 244 aaPredicted RBP12.77□□□□□ -0.36
USP48-213ENST00000529637 BHLHE23Q8NDY6 225 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 ELP5Q8TE02 316 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 ARL11Q969Q4 196 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 FOXN4Q96NZ1 517 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 TGM7Q96PF1 710 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 CLCC1Q96S66 551 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 SEC11CQ9BY50 192 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 CST11Q9H112 138 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 TMED7Q9Y3B3 224 aa12.77□□□□□ -0.36
USP48-213ENST00000529637 CDC14CA4D256 554 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 TTLL8A6PVC2 850 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 C9JQL5 133 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 ABHD16AO95870 558 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 HLA-DQA2P01906 255 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 SMIM6P0DI80 62 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 SDHAP31040 664 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
USP48-213ENST00000529637 MOGAT2Q3SYC2 334 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 LRRC69Q6ZNQ3 347 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 BPIFB2Q8N4F0 458 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 OR6N2Q8NGY6 317 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 ROBO4Q8WZ75 1007 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 ELF4Q99607 663 aaPredicted RBP12.77□□□□□ -0.37
USP48-213ENST00000529637 LAT2Q9GZY6 243 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 CLEC1BQ9P126 229 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 FAM221BA6H8Z2 402 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 C17orf105B2RV13 164 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 AGPAT2O15120 278 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 S100A9P06702 114 aaKnown RBP12.77□□□□□ -0.37
USP48-213ENST00000529637 FAM157CP0CG43 387 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 FZD2Q14332 565 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
USP48-213ENST00000529637 ALG10Q5BKT4 473 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 C14orf79Q96F83 325 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 KLHDC7BQ96G42 594 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 MOGAT1Q96PD6 335 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 AMELYQ99218 206 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 RSRP1Q9BUV0 290 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 TPSD1Q9BZJ3 242 aa12.77□□□□□ -0.37
USP48-213ENST00000529637 RPH3AQ9Y2J0 694 aaPredicted RBP12.77□□□□□ -0.37
USP48-213ENST00000529637 UNC13CQ8NB66 2214 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 SPTY2D1-AS1A0A0U1RR47 76 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 FITM1A5D6W6 292 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 SCDO00767 359 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 TXNL1O43396 289 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 OIP5O43482 229 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 FOXS1O43638 330 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 GLCEO94923 617 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 CD74P04233 296 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 F2RL1P55085 397 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 TAS2R19P59542 299 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 SMCO1Q147U7 214 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 ZNF141Q15928 474 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 SLC22A6Q4U2R8 563 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 Q6ZS52 159 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 OR2G2Q8NGZ5 317 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 ASB13Q8WXK3 278 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 POTEKPQ9BYX7 375 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 RCC2Q9P258 522 aaKnown RBP12.76□□□□□ -0.37
USP48-213ENST00000529637 HS3ST3A1Q9Y663 406 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 MYO15AQ9UKN7 3530 aa12.76□□□□□ -0.37
USP48-213ENST00000529637 TRBV5-7A0A0A0MS05 114 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms