RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SFXN2Q96NB2 322 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 OR2M2Q96R28 347 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 ACTR6Q9GZN1 396 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 DPAGT1Q9H3H5 408 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 NELFAQ9H3P2 528 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 NUFIP1Q9UHK0 495 aaKnown RBP13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 LHFPL6Q9Y693 200 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 LOC107986453A0A1B0GWG9 222 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 PMS2P1A4D2B8 440 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 G3V3Y1 287 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 ACOT7O00154 380 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 TFECO14948 347 aaPredicted RBP13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 XRCC3O43542 346 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 DHFRP00374 187 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 MSR1P21757 451 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 DDOSTP39656 456 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 RAB25P57735 213 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 SPEM2Q0P670 501 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 MADCAM1Q13477 382 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 CARD17Q5XLA6 110 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 FAM166AQ6J272 317 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 ANKRD16Q6P6B7 361 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 LUZP2Q86TE4 346 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 SERPINA12Q8IW75 414 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 C20orf196Q8IYI0 205 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 GJC3Q8NFK1 279 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 OR6M1Q8NGM8 313 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 SLC25A38Q96DW6 304 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 PBOV1Q9GZY1 135 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 NLKQ9UBE8 527 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 ZNF221Q9UK13 617 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 CLEC4AQ9UMR7 237 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 NUBP2Q9Y5Y2 271 aa13.1□□□□□ -0.31
ECHDC1-220ENST00000528402 KIAA1549Q9HCM3 1950 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 A0A087WV48 116 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 A0A0A6YYH2 397 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 LOC101059948A0A1B0GTJ6 334 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 A6NJ64 397 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 LRRC3CA6NJW4 275 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 INMT-MINDY4F8WBC2 141 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 TNFSF11O14788 317 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 DHHO43323 396 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 RAMP1O60894 148 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 KRT33AO76009 404 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 CD96P40200 585 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 SSBP1Q04837 148 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 SNTB2Q13425 540 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 PLA1AQ53H76 456 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 C1orf100Q5SVJ3 147 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 CORO6Q6QEF8 472 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 LINGO2Q7L985 606 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 KRT74Q7RTS7 529 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 CDH26Q8IXH8 852 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 TMEM123Q8N131 208 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 OR2V1Q8NHB1 315 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 CPNE4Q96A23 557 aaPredicted RBP13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 SMAD5Q99717 465 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 TAS2R8Q9NYW2 309 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 FBXL3Q9UKT7 428 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 DOCK10Q96BY6 2186 aa13.09□□□□□ -0.31
ECHDC1-220ENST00000528402 PCNX2A6NKB5 2137 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 A0A1B0GVC2 190 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 LOC390937A0A1W2PQ73 354 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 A6NIN4 97 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 LANCL1O43813 399 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 TRAPPC6AO75865 159 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 ACSM4P0C7M7 580 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 PTH2RP49190 550 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 YRDCQ86U90 279 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 UBE2J2Q8N2K1 259 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 CLEC1AQ8NC01 280 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 OR10S1Q8NGN2 331 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 OR6F1Q8NGZ6 308 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 PPP1R14AQ96A00 147 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 EMC7Q9NPA0 242 aa13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 DDX28Q9NUL7 540 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 PAQR5Q9NXK6 330 aaPredicted RBP13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 FOXD3Q9UJU5 478 aaPredicted RBP13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 RBMX2Q9Y388 322 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-220ENST00000528402 MASP2O00187 686 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 EIF1AYO14602 144 aaKnown RBP13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 SYT7O43581 403 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 GLSO94925 669 aaPredicted RBP13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 WNT11O96014 354 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 TTRP02766 147 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 HPNP05981 417 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 CD3GP09693 182 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms