RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SLC7A6Q92536 515 aa19.75■□□□□ 0.75
CPSF1-202ENST00000527827 SLITRK2Q9H156 845 aa19.75■□□□□ 0.75
CPSF1-202ENST00000527827 INTS9Q9NV88 658 aaKnown RBP19.75■□□□□ 0.75
CPSF1-202ENST00000527827 IL20RAQ9UHF4 553 aa19.75■□□□□ 0.75
CPSF1-202ENST00000527827 GPANK1O95872 356 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 PLATP00750 562 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 MDKP21741 143 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-202ENST00000527827 MTNR1AP48039 350 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 PRKCDQ05655 676 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 ANKDD1AQ495B1 522 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 METTL21CQ5VZV1 264 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 OAFQ86UD1 273 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 OR13C2Q8NGS9 318 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 PTP4A1Q93096 173 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 DACT3Q96B18 629 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-202ENST00000527827 UPRTQ96BW1 309 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 TPD52L3Q96J77 140 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 MAGEB18Q96M61 343 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 SSBP3Q9BWW4 388 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-202ENST00000527827 TMEM165Q9HC07 324 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 ADAM18Q9Y3Q7 739 aa19.74■□□□□ 0.75
CPSF1-202ENST00000527827 CMYA5Q8N3K9 4069 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 EFCAB9A8MZ26 197 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 ZNF205O95201 554 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 RAC2P15153 192 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 YAP1P46937 504 aaKnown RBP19.73■□□□□ 0.75
CPSF1-202ENST00000527827 GUCY1A3Q02108 690 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 MESTQ5EB52 335 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 OTPQ5XKR4 325 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 C1orf94Q6P1W5 598 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 OR5AS1Q8N127 324 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 ZNF420Q8TAQ5 688 aaPredicted RBP19.73■□□□□ 0.75
CPSF1-202ENST00000527827 Q96M85 177 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 COG8Q96MW5 612 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 RHCGQ9UBD6 479 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 SNX13Q9Y5W8 968 aa19.73■□□□□ 0.75
CPSF1-202ENST00000527827 VWFP04275 2813 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 IGHV2-70DA0A0C4DH43 119 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 A0A0G2JND7 137 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 MDFIC2A0A1B0GVS7 189 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 OR6C6A6NF89 314 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 J3KTA2 159 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 EDF1O60869 148 aaKnown RBP19.72■□□□□ 0.75
CPSF1-202ENST00000527827 RPS2P15880 293 aaKnown RBP19.72■□□□□ 0.75
CPSF1-202ENST00000527827 CTLA4P16410 223 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 ZNF26P17031 533 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-202ENST00000527827 CPT2P23786 658 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 SELENOWP63302 87 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 HLXQ14774 488 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-202ENST00000527827 C16orf87Q6PH81 154 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 LRRN1Q6UXK5 716 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 KLBQ86Z14 1044 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 OFCC1Q8IZS5 231 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 POU5F2Q8N7G0 328 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 ATG16L2Q8NAA4 619 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 FAM156AQ8NDB6 213 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 RAB40AQ8WXH6 277 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 TMIGD2Q96BF3 282 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 MEGF10Q96KG7 1140 aa19.72■□□□□ 0.75
CPSF1-202ENST00000527827 TRAV40A0A0B4J280 105 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 FAM220BPB1ANY3 271 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 IFNL4K9M1U5 179 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 FFAR1O14842 300 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 CYB5R3P00387 301 aaPredicted RBP19.71■□□□□ 0.75
CPSF1-202ENST00000527827 NPPAP01160 153 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 OMGP23515 440 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 IFNA8P32881 189 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 SLC9A3P48764 834 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 AQP6Q13520 282 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 CCDC92Q53HC0 331 aaPredicted RBP19.71■□□□□ 0.75
CPSF1-202ENST00000527827 COQ5Q5HYK3 327 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 BTNL3Q6UXE8 466 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 FAM122BQ7Z309 247 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 OR10AD1Q8NGE0 317 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 SIKE1Q9BRV8 207 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 PTTG3PQ9NZH4 202 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 GRHPRQ9UBQ7 328 aa19.71■□□□□ 0.75
CPSF1-202ENST00000527827 TEX13CA0A0J9YWL9 993 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 PRSS37A4D1T9 235 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 H0YL77 283 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 CDC42EP2O14613 210 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 MRASO14807 208 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 AHCYL1O43865 530 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 CD14P08571 375 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 RPL4P36578 427 aaKnown RBP19.7■□□□□ 0.74
CPSF1-202ENST00000527827 GNB2P62879 340 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 TRAM2Q15035 370 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 OR2T2Q6IF00 324 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 SLC27A4Q6P1M0 643 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 FBXW12Q6X9E4 464 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 PCYOX1LQ8NBM8 494 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 OR8G5Q8NG78 346 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 OR1F12Q8NHA8 337 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 TMEM246Q9BRR3 403 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 FNDC11Q9BVV2 318 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 ASH2LQ9UBL3 628 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 MIOXQ9UGB7 285 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 MMP24Q9Y5R2 645 aa19.7■□□□□ 0.74
CPSF1-202ENST00000527827 A0A087WUU8 490 aa19.69■□□□□ 0.74
CPSF1-202ENST00000527827 DBHP09172 617 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms