RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TNFRSF10AO00220 468 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 DVL2O14641 736 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 KNG1P01042 644 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 RAC3P60763 192 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 EXOSC6Q5RKV6 272 aaKnown RBP13.55□□□□□ -0.24
USP47-207ENST00000527733 GFRALQ6UXV0 394 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 TXNDC15Q96J42 360 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 OR8B4Q96RC9 309 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 CGGBP1Q9UFW8 167 aaPredicted RBP13.55□□□□□ -0.24
USP47-207ENST00000527733 CHST2Q9Y4C5 530 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 TRGV8A0A0C4DH27 118 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 OR6C6A6NF89 314 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 MCRIP1C9JLW8 97 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 PRAF2O60831 178 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 DNASE1P24855 282 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 MLF1P58340 268 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 CDK10Q15131 360 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 METTL11BQ5VVY1 283 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 C1QL3Q5VWW1 255 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 SPERTQ8NA61 448 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 OR6F1Q8NGZ6 308 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 TSPAN32Q96QS1 320 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 B3GAT1Q9P2W7 334 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 ZNF136P52737 540 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 CLDN6P56747 220 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 FABP5Q01469 135 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 AQP6Q13520 282 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 ELFN2Q5R3F8 820 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 GLIPR1L1Q6UWM5 242 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 KIF18BQ86Y91 864 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 TAS2R4Q9NYW5 299 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 TRAPPC4Q9Y296 219 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 C5orf49A4QMS7 147 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 CRYAAP02489 173 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 CD34P28906 385 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 CDAP32320 146 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 EIF2S3P41091 472 aaKnown RBP13.54□□□□□ -0.24
USP47-207ENST00000527733 CDKN2AP42771 156 aaKnown RBP13.54□□□□□ -0.24
USP47-207ENST00000527733 RPS23P62266 143 aaKnown RBP13.54□□□□□ -0.24
USP47-207ENST00000527733 IKZF1Q13422 519 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 ADGRG3Q86Y34 549 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 GTPBP8Q8N3Z3 284 aaPredicted RBP13.54□□□□□ -0.24
USP47-207ENST00000527733 UTRNP46939 3433 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 CENPVL1A0A0U1RR11 272 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 BPNT1O95861 308 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 PAHP00439 452 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 TAS2R31P59538 309 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 FMODQ06828 376 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 DESI1Q6ICB0 168 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 GALNT11Q8NCW6 608 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 OR1M1Q8NGA1 313 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 PBOV1Q9GZY1 135 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 MMP28Q9H239 520 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 RYDENQ9NUL5 291 aaKnown RBP13.54□□□□□ -0.24
USP47-207ENST00000527733 FKBP14Q9NWM8 211 aa13.54□□□□□ -0.24
USP47-207ENST00000527733 SLC22A23A1A5C7 686 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 ARPC1BO15143 372 aaKnown RBP13.53□□□□□ -0.24
USP47-207ENST00000527733 IGKV1D-16P01601 117 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 NGFRP08138 427 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 GIFP27352 417 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 DOC2BQ14184 412 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 RBM39Q14498 530 aaKnown RBP13.53□□□□□ -0.24
USP47-207ENST00000527733 AADACL4Q5VUY2 407 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 YIPF6Q96EC8 236 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 RRNAD1Q96FB5 475 aaKnown RBP13.53□□□□□ -0.24
USP47-207ENST00000527733 ZC3HAV1LQ96H79 300 aaKnown RBP13.53□□□□□ -0.24
USP47-207ENST00000527733 RNF170Q96K19 258 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 SLC6A15Q9H2J7 730 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 REV1Q9UBZ9 1251 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 XRCC2O43543 280 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 IFNA7P01567 189 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 GNMTQ14749 295 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 CSRP2Q16527 193 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 Q6ZTK2 550 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 CD163Q86VB7 1156 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 ASCC1Q8N9N2 400 aaKnown RBP13.53□□□□□ -0.24
USP47-207ENST00000527733 ZNF286AQ9HBT8 521 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 CHRM2P08172 466 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 RBP2P50120 134 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 AKR1C2P52895 323 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 SGPP2Q8IWX5 399 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 BPIFB2Q8N4F0 458 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 ZCCHC4Q9H5U6 513 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 RANBP3Q9H6Z4 567 aaPredicted RBP13.53□□□□□ -0.24
USP47-207ENST00000527733 CKAP5Q14008 2032 aa13.53□□□□□ -0.24
USP47-207ENST00000527733 GDNFP39905 211 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 ACAA2P42765 397 aaKnown RBP13.52□□□□□ -0.24
USP47-207ENST00000527733 GABRA2P47869 451 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 ZNF528Q3MIS6 628 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 GSG1LQ6UXU4 331 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 TMPRSS7Q7RTY8 843 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 OR13C5Q8NGS8 318 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 NELFAQ9H3P2 528 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 NXPH2O95156 264 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 MT-ND4P03905 459 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 IL1F10Q8WWZ1 152 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 CTHRC1Q96CG8 243 aa13.52□□□□□ -0.24
USP47-207ENST00000527733 PHB2Q99623 299 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms