RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 S100A14Q9HCY8 104 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 MYOZ1Q9NP98 299 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CYSLTR2Q9NS75 346 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 IMPAD1Q9NX62 359 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 TVP23BQ9NYZ1 205 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 REV1Q9UBZ9 1251 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CGGBP1Q9UFW8 167 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 GDF2Q9UK05 429 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 GRIP1Q9Y3R0 1128 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 COMMD3-BMI1R4GMX3 469 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 NOTCH2Q04721 2471 aa4.65□□□□□ -1.66
HMGB1P40-201ENST00000525121 LOC100509620A0A075B734 347 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TVP23AA6NH52 213 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF878C9JN71 531 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF593O00488 134 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 EI24O14681 340 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TIMM8AO60220 97 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SSX4O60224 188 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 GLCEO94923 617 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 GPANK1O95872 356 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CD8AP01732 235 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 APOC1P02654 83 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TFP02787 698 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TP53P04637 393 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SCG5P05408 212 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 ADRA2AP08913 450 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CLUP10909 449 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CD99P14209 185 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SELEP16581 610 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TNFSF4P23510 183 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 HSD11B1P28845 292 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 LIPAP38571 399 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 WNT5AP41221 380 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC6A9P48067 706 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 PDLIM4P50479 330 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TPTEP56180 551 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CDC42P60953 191 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 GRB2P62993 217 aaKnown RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CDK5Q00535 292 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 EIF2B1Q14232 305 aaKnown RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 PTGES3Q15185 160 aaKnown RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TESK1Q15569 626 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SWI5Q1ZZU3 235 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CLEC12BQ2HXU8 276 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 PCGF3Q3KNV8 242 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SPATA46Q5T0L3 261 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLX4IPQ5VYV7 408 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEM236Q5W0B7 351 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 OTPQ5XKR4 325 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 KDM4DQ6B0I6 523 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC18B1Q6NT16 456 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 ACSM5Q6NUN0 579 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CFAP77Q6ZQR2 320 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 RFPL4BQ6ZWI9 263 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 DCXRQ7Z4W1 244 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CPOQ8IVL8 374 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 GID4Q8IVV7 300 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 PAQR4Q8N4S7 273 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZNF454Q8N9F8 522 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 IGFBPL1Q8WX77 278 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 RFKQ969G6 155 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 APOBEC3DQ96AK3 386 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 Q96MF0 132 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 PIMREGQ9BSJ6 248 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 HCAR1Q9BXC0 346 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 GABARAPL3Q9BY60 117 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 MRPL37Q9BZE1 423 aaKnown RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 NMNAT2Q9BZQ4 307 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 VCXQ9H320 206 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 MED20Q9H944 212 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 HINT3Q9NQE9 182 aaKnown RBP4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 C8orf4Q9NR00 106 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CENPMQ9NSP4 180 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TBCCD1Q9NVR7 557 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TAAR3PQ9P1P4 343 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 CYB5R1Q9UHQ9 305 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 FZR1Q9UM11 496 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 LHFPL6Q9Y693 200 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 TMEM14AQ9Y6G1 99 aa4.65□□□□□ -1.67
HMGB1P40-201ENST00000525121 ADGRG4Q8IZF6 3080 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 NAV2Q8IVL1 2488 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ERICH4A6NGS2 130 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 SLC22A31A6NKX4 558 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 SNTNA6NMZ2 147 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ZAR1LA6NP61 321 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 F5H5K5 113 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 H0YHG0 523 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 H3BNX3 289 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 M0R135 149 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 NDUFS8O00217 210 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 TLX2O43763 284 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ICMTO60725 284 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 MITFO75030 526 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 F12P00748 615 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 IGHV4-39P01824 125 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 LCATP04180 440 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 ALPLP05186 524 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 LYNP07948 512 aa4.64□□□□□ -1.67
HMGB1P40-201ENST00000525121 H2BFMP0C1H6 154 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms