RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 RAB3CQ96E17 227 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 ZBED6CLQ96FA7 236 aaPredicted RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 RNF170Q96K19 258 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 ZNF251Q9BRH9 671 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 DGCR6LQ9BY27 220 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 PARD6GQ9BYG4 376 aaPredicted RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 DERL2Q9GZP9 239 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 NXF3Q9H4D5 531 aaKnown RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 KIR3DX1Q9H7L2 352 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 NHEJ1Q9H9Q4 299 aaPredicted RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 PLEKHA3Q9HB20 300 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 BEX1Q9HBH7 125 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 RETNQ9HD89 108 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 FGF20Q9NP95 211 aaPredicted RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 IMP3Q9NV31 184 aaKnown RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 NECAP2Q9NVZ3 263 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 OCIAD1Q9NX40 245 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 TAS2R16Q9NYV7 291 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 EIF3KQ9UBQ5 218 aaKnown RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 ZNF282Q9UDV7 671 aaPredicted RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 ASIC3Q9UHC3 531 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 CLEC2DQ9UHP7 191 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 LSM7Q9UK45 103 aaKnown RBP3.53□□□□□ -1.84
PCM1-223ENST00000524356 FADS3Q9Y5Q0 445 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 SAR1BQ9Y6B6 198 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 PI4KAP42356 2102 aa3.53□□□□□ -1.84
PCM1-223ENST00000524356 AHCTF1Q8WYP5 2266 aa3.53□□□□□ -1.85
PCM1-223ENST00000524356 DOPEY2Q9Y3R5 2298 aa3.53□□□□□ -1.85
PCM1-223ENST00000524356 TEX15Q9BXT5 2789 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 GREB1Q4ZG55 1949 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 IGLV5-37A0A075B6J1 123 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 IGHV2-70DA0A0C4DH43 119 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 NEDD8-MDP1E9PL57 170 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 K7ERI5 159 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 GOSR2O14653 212 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TFECO14948 347 aaPredicted RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 PFKFB2O60825 505 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ZNF189O75820 626 aaPredicted RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 ZMPSTE24O75844 475 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 OR7A10O76100 309 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 RPP14O95059 124 aaKnown RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 RPLP0P05388 317 aaKnown RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 SERPINA6P08185 405 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 LIFP15018 202 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 PSMC3P17980 439 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 HTR2CP28335 458 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TEAD1P28347 426 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ACVR1BP36896 505 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TNFSF9P41273 254 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 GPR1P46091 355 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 GDI2P50395 445 aaKnown RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 GPX6P59796 221 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 HERV-K104P61576 105 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ZNF33AQ06730 810 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 PPIDQ08752 370 aaKnown RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 SCRN3Q0VDG4 424 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ST3GAL3Q11203 375 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 DLG1Q12959 904 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 CASP8Q14790 479 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TRAM2Q15035 370 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TEAD2Q15562 447 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 UAP1Q16222 522 aaPredicted RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 PSMD5Q16401 504 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 CLVS2Q5SYC1 327 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 FAM120AOSQ5T036 256 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 UTF1Q5T230 341 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 PVRIGQ6DKI7 326 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 PRMT9Q6P2P2 845 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 STAC2Q6ZMT1 411 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 PRSS48Q7RTY5 328 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 DEFB119Q8N690 84 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 OR2T33Q8NG76 320 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ZPLD1Q8TCW7 415 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TOMM40LQ969M1 308 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 APH1AQ96BI3 265 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 CCDC126Q96EE4 140 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 DNAJA3Q96EY1 480 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 SERPINB11Q96P15 392 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ZNF670Q9BS34 389 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ULBP2Q9BZM5 246 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ACTR3CQ9C0K3 210 aaPredicted RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 PIGUQ9H490 435 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 WDR55Q9H6Y2 383 aaPredicted RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 NTN4Q9HB63 628 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ADGRL4Q9HBW9 690 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 ZBTB20Q9HC78 741 aaPredicted RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 VCX3AQ9NNX9 186 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TMEM9BQ9NQ34 198 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.52□□□□□ -1.85
PCM1-223ENST00000524356 NXT1Q9UKK6 140 aaKnown RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 SLC17A4Q9Y2C5 497 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 GMPPBQ9Y5P6 360 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 TSSC4Q9Y5U2 329 aaPredicted RBP3.52□□□□□ -1.85
PCM1-223ENST00000524356 CREBBPQ92793 2442 aa3.52□□□□□ -1.85
PCM1-223ENST00000524356 EML5Q05BV3 1969 aa3.51□□□□□ -1.85
PCM1-223ENST00000524356 IGLV5-45A0A087WSX0 123 aa3.51□□□□□ -1.85
PCM1-223ENST00000524356 A0A1W2PRF3 423 aa3.51□□□□□ -1.85
PCM1-223ENST00000524356 A0A1W2PRM7 423 aa3.51□□□□□ -1.85
PCM1-223ENST00000524356 TCRBV9S1A1TA0A576 114 aa3.51□□□□□ -1.85
PCM1-223ENST00000524356 TRABD2BA6NFA1 517 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms