RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	C1orf94	Q6P1W5	598 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	PGM2L1	Q6PCE3	622 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	TBPL2	Q6SJ96	375 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	VASH1	Q7L8A9	365 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	SAMD8	Q96LT4	415 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	SYT4	Q9H2B2	425 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	CCDC134	Q9H6E4	229 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	NTN4	Q9HB63	628 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	IL19	Q9UHD0	177 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	ATPIF1	Q9UII2	106 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	KLHL21	Q9UJP4	597 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	AURKC	Q9UQB9	309 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	PPP1R3C	Q9UQK1	317 aa		13.25	□□□□□ -0.29
CDK16-222	ENST00000523699	SLC16A7	O60669	478 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	IGHV2-70	P01814	119 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	CTLA4	P16410	223 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	KITLG	P21583	273 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	FUT4	P22083	530 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	COMP	P49747	757 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	RPS6KA3	P51812	740 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	LSM6	P62312	80 aa	Known RBP	13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	BTG1	P62324	171 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	KRT72	Q14CN4	511 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	TMEM155	Q4W5P6	130 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	SLC27A4	Q6P1M0	643 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	HACD2	Q6Y1H2	254 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	FAM122B	Q7Z309	247 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	MUC20	Q8N307	709 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	OR5L1	Q8NGL2	311 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	SLC7A13	Q8TCU3	470 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	RASD2	Q96D21	266 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	CMBL	Q96DG6	245 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	RSRC1	Q96IZ7	334 aa	Known RBP	13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	MRI1	Q9BV20	369 aa		13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	DDX28	Q9NUL7	540 aa	Known RBP	13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	GMPR2	Q9P2T1	348 aa	Known RBP	13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	SAMD4A	Q9UPU9	718 aa	Known RBP	13.24	□□□□□ -0.29
CDK16-222	ENST00000523699	NBEAL1	Q6ZS30	2694 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699		A0A1W2PRQ8	180 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	OR6C6	A6NF89	314 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	IFNL4	K9M1U5	179 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	SOCS2	O14508	198 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	SCG5	P05408	212 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	CENPA	P49450	140 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	DGCR6	Q14129	220 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	ESCO2	Q56NI9	601 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	ZNF283	Q8N7M2	679 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	OR1F12	Q8NHA8	337 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	PTP4A1	Q93096	173 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	POP5	Q969H6	163 aa	Known RBP	13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	GPX7	Q96SL4	187 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	VSX1	Q9NZR4	365 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	OR5V1	Q9UGF6	321 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	SIGLEC7	Q9Y286	467 aa		13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	COA3	Q9Y2R0	106 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK16-222	ENST00000523699	TMEM89	A2RUT3	159 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	RAC2	P15153	192 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	NCK1	P16333	377 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	RHCE	P18577	417 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	CRABP1	P29762	137 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	MDH2	P40926	338 aa	Known RBP	13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	DPY19L2P2	Q6ZN68	376 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	ATG16L2	Q8NAA4	619 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	ITLN1	Q8WWA0	313 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	HAVCR1	Q96D42	359 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	CMTM5	Q96DZ9	223 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	OR2V2	Q96R30	315 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	PLA2G12A	Q9BZM1	189 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	HDHD2	Q9H0R4	259 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	POFUT1	Q9H488	388 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	PATZ1	Q9HBE1	687 aa	Known RBP	13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	SPAG4	Q9NPE6	437 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	NRIP3	Q9NQ35	241 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	OPN4	Q9UHM6	478 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	STARD10	Q9Y365	291 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	AUP1	Q9Y679	476 aa		13.22	□□□□□ -0.29
CDK16-222	ENST00000523699	UNC119B	A6NIH7	251 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	LRRC30	A6NM36	301 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	ZNF26	P17031	533 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	SRP9	P49458	86 aa	Known RBP	13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	SPRN	Q5BIV9	151 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	SMARCD3	Q6STE5	483 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	JAZF1	Q86VZ6	243 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	OR5AS1	Q8N127	324 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	GJC3	Q8NFK1	279 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	FANK1	Q8TC84	345 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	C22orf15	Q8WYQ4	148 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	ZNF582	Q96NG8	517 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	GPA33	Q99795	319 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	NUAK2	Q9H093	628 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	ZMAT3	Q9HA38	289 aa	Known RBP	13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	DCAF16	Q9NXF7	216 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	PTTG3P	Q9NZH4	202 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	EGFL7	Q9UHF1	273 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	IL20RA	Q9UHF4	553 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699	IER3IP1	Q9Y5U9	82 aa		13.21	□□□□□ -0.29
CDK16-222	ENST00000523699		A8MXK9	166 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms