RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 SLC7A6Q92536 515 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 PTP4A1Q93096 173 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 PERPQ96FX8 193 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 IL4I1Q96RQ9 567 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 INTS14Q96SY0 518 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 PITX2Q99697 317 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 HDHD2Q9H0R4 259 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 ZNF442Q9H7R0 627 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 CBLN4Q9NTU7 201 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 BEX4Q9NWD9 120 aaPredicted RBP10.22□□□□□ -0.77
HPS4-218ENST00000519774 PLA2G2EQ9NZK7 142 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 EIF3KQ9UBQ5 218 aaKnown RBP10.22□□□□□ -0.77
HPS4-218ENST00000519774 KCNG2Q9UJ96 466 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 GDF2Q9UK05 429 aaPredicted RBP10.22□□□□□ -0.77
HPS4-218ENST00000519774 FZR1Q9UM11 496 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 MAST4O15021 2626 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 TEX15Q9BXT5 2789 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 RTTNQ86VV8 2226 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 OR6C6A6NF89 314 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 VSTM5A8MXK1 200 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 PRODHO43272 600 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 SYNGR3O43761 229 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 TLX2O43763 284 aaPredicted RBP10.21□□□□□ -0.77
HPS4-218ENST00000519774 ABHD16AO95870 558 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 COX5BP10606 129 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 PSKH1P11801 424 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 GSTT1P30711 240 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 GLRXP35754 106 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 GGT2P36268 569 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 SERPINF1P36955 418 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 WNT5AP41221 380 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 NAA10P41227 235 aaPredicted RBP10.21□□□□□ -0.77
HPS4-218ENST00000519774 BLVRAP53004 296 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 HIST1H3AP68431 136 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 ELF3P78545 371 aaPredicted RBP10.21□□□□□ -0.77
HPS4-218ENST00000519774 APOFQ13790 326 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 MSMPQ1L6U9 139 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 LRRC36Q1X8D7 754 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 ELFN2Q5R3F8 820 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 SPATA46Q5T0L3 261 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 HIST2H3PS2Q5TEC6 136 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 RGS7BPQ6MZT1 257 aaPredicted RBP10.21□□□□□ -0.77
HPS4-218ENST00000519774 RFPL4BQ6ZWI9 263 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 HIST2H3AQ71DI3 136 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 BCDIN3DQ7Z5W3 292 aaKnown RBP10.21□□□□□ -0.77
HPS4-218ENST00000519774 ZNF101Q8IZC7 436 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 ABHD4Q8TB40 342 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 FAM81AQ8TBF8 368 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 TMEM163Q8TC26 289 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 IGFBPL1Q8WX77 278 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 MBD6Q96DN6 1003 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 SLC29A1Q99808 456 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 SYT3Q9BQG1 590 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 CACNG6Q9BXT2 260 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 TOR3AQ9H497 397 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 CYB5R1Q9UHQ9 305 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 GRIP1Q9Y3R0 1128 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 CMAHPQ9Y471 501 aa10.21□□□□□ -0.77
HPS4-218ENST00000519774 USF3Q68DE3 2245 aa10.21□□□□□ -0.78
HPS4-218ENST00000519774 B9A039 149 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 ZNF593O00488 134 aaPredicted RBP10.2□□□□□ -0.78
HPS4-218ENST00000519774 SELENOFO60613 162 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 TMCC2O75069 709 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 DBHP09172 617 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 RAD52P43351 418 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 PTH2RP49190 550 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 SNRPD2P62316 118 aaKnown RBP10.2□□□□□ -0.78
HPS4-218ENST00000519774 EIF2B1Q14232 305 aaKnown RBP10.2□□□□□ -0.78
HPS4-218ENST00000519774 SLC35D3Q5M8T2 416 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 LCN1P1Q5VSP4 162 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 C11orf71Q6IPW1 123 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 ARL9Q6T311 187 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 SPATC1Q76KD6 591 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 DPY19L4Q7Z388 723 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 DCXRQ7Z4W1 244 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 OR1J1Q8NGS3 322 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 MRPL24Q96A35 216 aaKnown RBP10.2□□□□□ -0.78
HPS4-218ENST00000519774 MAP6Q96JE9 813 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 C4orf45Q96LM5 186 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 MBOAT4Q96T53 435 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 COQ7Q99807 217 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 ATF6BQ99941 703 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 FOXC2Q99958 501 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 MRPL37Q9BZE1 423 aaKnown RBP10.2□□□□□ -0.78
HPS4-218ENST00000519774 BCL2L14Q9BZR8 327 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 PLK3Q9H4B4 646 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 IMPAD1Q9NX62 359 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 H2AFY2Q9P0M6 372 aaPredicted RBP10.2□□□□□ -0.78
HPS4-218ENST00000519774 ATPIF1Q9UII2 106 aa10.2□□□□□ -0.78
HPS4-218ENST00000519774 CCDC182A6NF36 153 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 OVOL3O00110 214 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 NGFP01138 241 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 MRPL3P09001 348 aaKnown RBP10.19□□□□□ -0.78
HPS4-218ENST00000519774 SLC2A5P22732 501 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 PEX2P28328 305 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 PCSK6P29122 969 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 UCP2P55851 309 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 ATP5J2P56134 94 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 CDC42P60953 191 aa10.19□□□□□ -0.78
HPS4-218ENST00000519774 PPP1CBP62140 327 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms