RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 FGF14Q92915 247 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 PTP4A1Q93096 173 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CREB3L1Q96BA8 519 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 BPIFA2Q96DR5 249 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 RBM18Q96H35 190 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 PGAM5Q96HS1 289 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ST6GAL2Q96JF0 529 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ZNF285Q96NJ3 590 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NECTIN4Q96NY8 510 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GPX7Q96SL4 187 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 TEAD3Q99594 435 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NRTNQ99748 197 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 GTPBP2Q9BX10 602 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 NDEL1Q9GZM8 345 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 S1PR5Q9H228 398 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 SLC28A3Q9HAS3 691 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ADAP2Q9NPF8 381 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 NOX4Q9NPH5 578 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 MKKSQ9NPJ1 570 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 EQTNQ9NQ60 294 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 TIGARQ9NQ88 270 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CNIH4Q9P003 139 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 EMC3Q9P0I2 261 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 AKAP7Q9P0M2 348 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 COPZ2Q9P299 210 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 ABI3Q9P2A4 366 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 PRODH2Q9UF12 536 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 IL20RAQ9UHF4 553 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 POU2F3Q9UKI9 436 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 MRPS33Q9Y291 106 aaKnown RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 SLC6A5Q9Y345 797 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 CSNK1G3Q9Y6M4 447 aa3.33□□□□□ -1.88
CAST-242ENST00000515063 COL5A1P20908 1838 aaPredicted RBP3.33□□□□□ -1.88
CAST-242ENST00000515063 CENPFP49454 3210 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 SCN3AQ9NY46 2000 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 A0A087WUJ7 227 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 FAM240BA0A1B0GVZ2 78 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 A0A1B0GWA3 101 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 OR6C74A6NCV1 312 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 PRR23AA6NEV1 266 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 NAP1L6A6NFF2 107 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 RIIAD1A6NNX1 92 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 INMT-MINDY4F8WBC2 141 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 CLDN4O14493 209 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 SOCS6O14544 535 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 CDC42EP2O14613 210 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 HS3ST1O14792 307 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ARHGEF9O43307 516 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 SULT1B1O43704 296 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 GSTZ1O43708 216 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 ORC5O43913 435 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 FGF17O60258 216 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 UBL3O95164 117 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 NSA2O95478 260 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 KLF8O95600 359 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 EML2O95834 649 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 DHFRP00374 187 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 PLGP00747 810 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 CRYAAP02489 173 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 C1QBP02746 253 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 SAGP10523 405 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 RNH1P13489 461 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 MYOGP15173 224 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 RAB3BP20337 219 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 S1PR1P21453 382 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 TCEA1P23193 301 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 AK4P27144 223 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 HTR2AP28223 471 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ACSL1P33121 698 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 GABRA3P34903 492 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 PSMB10P40306 273 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 MNDAP41218 407 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ACAA2P42765 397 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 FASLGP48023 281 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 INPP1P49441 399 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 EMDP50402 254 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 GBX2P52951 348 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 SLC25A1P53007 311 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 PRPS1P60891 318 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 MRPS34P82930 218 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 ZNF85Q03923 595 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 MXD1Q05195 221 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 FUT7Q11130 342 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 HTR4Q13639 388 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 IL18Q14116 193 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 SERTAD2Q14140 314 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ANGPT1Q15389 498 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 EFNB3Q15768 340 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ALG11Q2TAA5 492 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 PCGF3Q3KNV8 242 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 CDONQ4KMG0 1287 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 DEFB134Q4QY38 66 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 TCTE1Q5JU00 501 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 CLEC12AQ5QGZ9 265 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ATAD3CQ5T2N8 411 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 PMS2CLQ68D20 193 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 DMKNQ6E0U4 476 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 TMEM53Q6P2H8 277 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms