RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 GHRLQ9UBU3 117 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 LAMP3Q9UQV4 416 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 TMEM184BQ9Y519 407 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 KIR2DS1A0A191URI9 304 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 SOX18P35713 384 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 KIR2DS4P43632 304 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 PXNP49023 591 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 KIR2DS1Q14954 304 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 NR0B2Q15466 257 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 CCSMST1Q4G0I0 132 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 CCNL2Q96S94 520 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 BCO1Q9HAY6 547 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 CHST11Q9NPF2 352 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 GDF2Q9UK05 429 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 PIGLQ9Y2B2 252 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 COA3Q9Y2R0 106 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 ARL2-SNX15V9GYD0 113 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 PLPP1O14494 284 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 DVL1O14640 695 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 OLFM2O95897 454 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 EDN3P14138 238 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 DVL1P1P54792 670 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 SLC35A1P78382 337 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 CATSPERDQ86XM0 798 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 MISPQ8IVT2 679 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 OR52B4Q8NGK2 314 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 LCORQ96JN0 433 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 SLIRPQ9GZT3 109 aaKnown RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 NARFLQ9H6Q4 476 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 NUMBLQ9Y6R0 609 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 GPR31O00270 319 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 B3GALT4O96024 378 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 FGF7P21781 194 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 SDHAP31040 664 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 COL13A1Q5TAT6 717 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-214ENST00000515035 OR2L13Q8N349 312 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 NUDCD2Q8WVJ2 157 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 SLC22A12Q96S37 553 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 TAAR2Q9P1P5 351 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 EFSO43281 561 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 NXPH2O95156 264 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CTRB1P17538 263 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CD38P28907 300 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 TRIM61Q5EBN2 209 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 FAHD1Q6P587 224 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SYS1Q8N2H4 156 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SMIM4Q8WVI0 70 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SMIM19Q96E16 107 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 AKR1E2Q96JD6 320 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CTDSP1Q9GZU7 261 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 MARCH5Q9NX47 278 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 RNF150Q9ULK6 438 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CTNSO60931 367 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 PCBP4P57723 403 aaKnown RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 UBE2G1P62253 170 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 RANP62826 216 aaKnown RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 DOC2BQ14184 412 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 HSF5Q4G112 596 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 TDHQ8IZJ6 230 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 ASB13Q8WXK3 278 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 OBP2AQ9NY56 170 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SLCO2B1O94956 709 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SLC35E2P0CK97 266 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SNRPEP62304 92 aaKnown RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 GRB2P62993 217 aaKnown RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 ARG2P78540 354 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF85Q03923 595 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 ACKR1Q16570 336 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 UQCC3Q6UW78 93 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 LILRA3Q8N6C8 439 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CNEP1R1Q8N9A8 125 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 EMG1Q92979 244 aaKnown RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 AQP8O94778 261 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 GSTP1P09211 210 aaKnown RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SPP1P10451 314 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SEMA3BQ13214 749 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 TIGITQ495A1 244 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 NCR3LG1Q68D85 454 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 KDF1Q8NAX2 398 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 OR10D4PQ8NGN7 298 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CLCF1Q9UBD9 225 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 SH3BGRL2Q9UJC5 107 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 FAM96BQ9Y3D0 163 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 KNL1Q8NG31 2342 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 ZNF732B4DXR9 585 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 HMGN4O00479 90 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 TOX4O94842 621 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 NID1P14543 1247 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 HIST1H1CP16403 213 aaKnown RBP12.14□□□□□ -0.47
TCOF1-214ENST00000515035 CALCRP30988 508 aa12.14□□□□□ -0.47
TCOF1-214ENST00000515035 KRTDAPP60985 99 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms