RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PPP1R3CQ9UQK1 317 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 CHST2Q9Y4C5 530 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 EPOPA6NHQ4 379 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 FZD7O75084 574 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 IL6RP08887 468 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 ANKRD34CP0C6C1 535 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 KHKP50053 298 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 RAB7AP51149 207 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 HERV-K104P63124 156 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 MEF2DQ14814 521 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 ZNF750Q32MQ0 723 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 LINC01559Q495D7 138 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 C12orf73Q69YU5 71 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 PGBD2Q6P3X8 592 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 MEX3DQ86XN8 651 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 OR4C5Q8NGB2 326 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 OR56B1Q8NGI3 324 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC7A13Q8TCU3 470 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 CNRIP1Q96F85 164 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 TP53RKQ96S44 253 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 MYADMQ96S97 322 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 RPP25Q9BUL9 199 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 CDCA4Q9BXL8 241 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 RPS10P5Q9NQ39 176 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 CES1P1Q9UKY3 287 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 V9GYS6 101 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 A0A1W2PR48 441 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 LINC01565O15544 149 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 CHRM4P08173 479 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 EPXP11678 715 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 OSMP13725 252 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ACKR3P25106 362 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 BRS3P32247 399 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 PBX2P40425 430 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SOX3P41225 446 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ZNF84P51523 738 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ERVS71-1P61550 626 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 GINS1Q14691 196 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 EXOSC6Q5RKV6 272 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 WFDC8Q8IUA0 241 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 OR7G2Q8NG99 324 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 OR13D1Q8NGV5 346 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 GRHL3Q8TE85 626 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 FGF11Q92914 225 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SCARF2Q96GP6 870 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC35G5Q96KT7 338 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 TAPBPLQ9BX59 468 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SEC11CQ9BY50 192 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 CNOT2Q9NZN8 540 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 DNAJC27Q9NZQ0 273 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 PRODH2Q9UF12 536 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 OR52A1Q9UKL2 312 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 LSM2Q9Y333 95 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 MSRB2Q9Y3D2 182 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ATG4BQ9Y4P1 393 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 MYO15AQ9UKN7 3530 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SCN2AQ99250 2005 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 TRAV26-1A0A087WT03 109 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 GLOD5A6NK44 160 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SCGNO76038 276 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 EML2O95834 649 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 PIPP12273 146 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 DRD2P14416 443 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 BCKDHBP21953 392 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 HNRNPA2B1P22626 353 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ITPKBP27987 946 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 CHRNB4P30926 498 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SSR2P43308 183 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 CDC42P60953 191 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 BDH1Q02338 343 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 CEBPEQ15744 281 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 NDUFA9Q16795 377 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 C2orf76Q3KRA6 126 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ARHGAP11BQ3KRB8 267 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 TMEM255AQ5JRV8 349 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ABHD17CQ6PCB6 329 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 PARM1Q6UWI2 310 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 TMEM144Q7Z5S9 345 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ISOC2Q96AB3 205 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ADGRG7Q96K78 797 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 SAMD8Q96LT4 415 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 CMKLR1Q99788 373 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ANKRA2Q9H9E1 313 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 BARX1Q9HBU1 254 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 B3GAT2Q9NPZ5 323 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 PHPT1Q9NRX4 125 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 RXFP3Q9NSD7 469 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 P2RX2Q9UBL9 471 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 CAMK2AQ9UQM7 478 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 FXYD6-FXYD2A0A087WZ82 144 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 A0A1W2PQU0 124 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 FAAHO00519 579 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ENTPD6O75354 484 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 AQP8O94778 261 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 PDGFBP01127 241 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 APODP05090 189 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 ALPPL2P10696 532 aa6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 HIST1H1TP22492 207 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-219ENST00000514743 PSMB10P40306 273 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms