RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 EEF1AKMT3Q96AZ1 226 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 ECHDC3Q96DC8 303 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 CHP1Q99653 195 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 SPIN2AQ99865 258 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 MICU1Q9BPX6 476 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 SPIN2BQ9BPZ2 258 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 FAM49BQ9NUQ9 324 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 DCAF16Q9NXF7 216 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 CCDC59Q9P031 241 aaKnown RBP2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 CTSFQ9UBX1 484 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 GAKO14976 1311 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 NCBP2LA6PVI3 153 aaKnown RBP2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 RAD51BO15315 384 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 FOXH1O75593 365 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF286BP0CG31 522 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 ATF6P18850 670 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 PRR3P79522 188 aaKnown RBP2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 SNRNP35Q16560 246 aaKnown RBP2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 ORMDL2Q53FV1 153 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 UBE2UQ5VVX9 321 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 TMEM220Q6QAJ8 160 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 SCD5Q86SK9 330 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 UBALD2Q8IYN6 164 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF561Q8N587 486 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 METTL13Q8N6R0 699 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 NPWQ8N729 165 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 OR8U1Q8NH10 309 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 LYPD6BQ8NI32 183 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 PIFOQ8TCI5 191 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 DNAJC1Q96KC8 554 aaKnown RBP2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 RSPO3Q9BXY4 272 aaPredicted RBP2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 ANKRD60Q9BZ19 345 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 TMEM14AQ9Y6G1 99 aa2.89□□□□□ -1.95
HMGCS1-207ENST00000514610 SGK1O00141 431 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 BET1O15155 118 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CDH16O75309 829 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 RDH16O75452 317 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 AQP8O94778 261 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 VAMP5O95183 116 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 ARG1P05089 322 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 LINC00869P0C866 280 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CT45A6P0DMU7 189 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CT45A5P0DMU8 189 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CT45A7P0DMV0 189 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 BCKDHBP21953 392 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 WARSP23381 471 aaKnown RBP2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 NPY1RP25929 384 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 OR1E1P30953 314 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 SSTR5P35346 364 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 C21orf59P57076 290 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 PPP1CBP62140 327 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CCNA1P78396 465 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 TRAM2Q15035 370 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 RCN1Q15293 331 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 LY6EQ16553 131 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 HSDL1Q3SXM5 330 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 SMUG1Q53HV7 270 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CT45A1Q5HYN5 189 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 SAXO2Q658L1 398 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CMC1Q7Z7K0 106 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 LGI3Q8N145 548 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 CT45A3Q8NHU0 189 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 COQ8AQ8NI60 647 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 FAM81AQ8TBF8 368 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 LRRC29Q8WV35 223 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 TMEM230Q96A57 120 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 NARS2Q96I59 477 aaKnown RBP2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 PRRC1Q96M27 445 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 TIMM17AQ99595 171 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 GEMIN7Q9H840 131 aaKnown RBP2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 EDA2RQ9HAV5 297 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 RFNGQ9Y644 331 aa2.88□□□□□ -1.95
HMGCS1-207ENST00000514610 A0A075B6Q4 140 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 H7C417 338 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 RAD51CO43502 376 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 HUS1O60921 280 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 FLOT1O75955 427 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 YIF1AO95070 293 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 MYL2P10916 166 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 GTF2E2P29084 291 aaKnown RBP2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 SYKP43405 635 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 PRRX1P54821 245 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 RGS8P57771 180 aaPredicted RBP2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 UBE2NP61088 152 aaKnown RBP2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 QPRTQ15274 297 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 PGGHGQ32M88 737 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 SPANXN2Q5MJ10 180 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 NPSR1Q6W5P4 371 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 CBLN2Q8IUK8 224 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 C11orf72Q8NBR9 251 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 OR52E2Q8NGJ4 325 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF461Q8TAF7 563 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 MCUR1Q96AQ8 359 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF382Q96SR6 550 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 BEX1Q9HBH7 125 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 RAB20Q9NX57 234 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 GCNT4Q9P109 453 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 MTFP1Q9UDX5 166 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 INSRP06213 1382 aa2.87□□□□□ -1.95
HMGCS1-207ENST00000514610 CCNKO75909 580 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms