RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 DNAL1Q4LDG9 190 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 PABPC1L2AQ5JQF8 200 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SPATA46Q5T0L3 261 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 FIP1L1Q6UN15 594 aaKnown RBP11.67□□□□□ -0.54
SPCS3-204ENST00000513139 BTNL3Q6UXE8 466 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 VTCN1Q7Z7D3 282 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 ZER1Q7Z7L7 766 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 ARHGAP24Q8N264 748 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 BHLHE22Q8NFJ8 381 aaPredicted RBP11.67□□□□□ -0.54
SPCS3-204ENST00000513139 VANGL1Q8TAA9 524 aaPredicted RBP11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SLC25A40Q8TBP6 338 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 TPD52L3Q96J77 140 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 POM121L2Q96KW2 1035 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SAMD8Q96LT4 415 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SLC30A2Q9BRI3 323 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 OR2J1Q9GZK6 312 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 DCAF16Q9NXF7 216 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SLC13A4Q9UKG4 626 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 SH3GLB1Q9Y371 365 aa11.67□□□□□ -0.54
SPCS3-204ENST00000513139 TRAV40A0A0B4J280 105 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 MDFIC2A0A1B0GVS7 189 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 LRRN3E7EW58 273 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 ARPC2O15144 300 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 GMNNO75496 209 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 CLPXO76031 633 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 IFNA14P01570 189 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 WNT2P09544 360 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 MDH2P40926 338 aaKnown RBP11.66□□□□□ -0.54
SPCS3-204ENST00000513139 OR1E2P47887 323 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 KRTAP10-3P60369 221 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 SELENOWP63302 87 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 CDK5R2Q13319 367 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 OR1Q1Q15612 314 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 NPTX1Q15818 432 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 DEFB112Q30KQ8 113 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 PGM2L1Q6PCE3 622 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 CYP2R1Q6VVX0 501 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 Q6YL49 198 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 JAZF1Q86VZ6 243 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 MUC20Q8N307 709 aaPredicted RBP11.66□□□□□ -0.54
SPCS3-204ENST00000513139 OR6T1Q8NGN1 323 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 RAB40AQ8WXH6 277 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 DACT3Q96B18 629 aaPredicted RBP11.66□□□□□ -0.54
SPCS3-204ENST00000513139 CCDC124Q96CT7 223 aaKnown RBP11.66□□□□□ -0.54
SPCS3-204ENST00000513139 SIGLEC11Q96RL6 698 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 ARHGDIGQ99819 225 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 SSBP3Q9BWW4 388 aaPredicted RBP11.66□□□□□ -0.54
SPCS3-204ENST00000513139 KCNN2Q9H2S1 579 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 EVA1AQ9H8M9 152 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 GORASP2Q9H8Y8 452 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 TAS2R5Q9NYW4 299 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 RNF114Q9Y508 228 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 SNX13Q9Y5W8 968 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 POMT1Q9Y6A1 747 aa11.66□□□□□ -0.54
SPCS3-204ENST00000513139 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.54
SPCS3-204ENST00000513139 IGHV2-70DA0A0C4DH43 119 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 CENPBD1B2RD01 187 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 IGHG1P01857 330 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 ATP6V1B2P21281 511 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 TNFSF4P23510 183 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 RASSF2P50749 326 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 ZNF133P52736 654 aaPredicted RBP11.65□□□□□ -0.54
SPCS3-204ENST00000513139 CDH12P55289 794 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 RGS8P57771 180 aaPredicted RBP11.65□□□□□ -0.54
SPCS3-204ENST00000513139 PPP1CBP62140 327 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 GABPB1Q06547 395 aaPredicted RBP11.65□□□□□ -0.54
SPCS3-204ENST00000513139 TRIM25Q14258 630 aaKnown RBP11.65□□□□□ -0.54
SPCS3-204ENST00000513139 MTX3Q5HYI7 312 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 ZNF774Q6NX45 483 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 LINC00114Q6XXX2 140 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 CBLL1Q75N03 491 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 LRRC18Q8N456 261 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 FAM86B1Q8N7N1 296 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 OR10S1Q8NGN2 331 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 MCHR2Q969V1 340 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 FAM71F1Q96KD3 344 aaPredicted RBP11.65□□□□□ -0.54
SPCS3-204ENST00000513139 SEPHS2Q99611 448 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 CHIAQ9BZP6 476 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 SIAEQ9HAT2 523 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 MSL2Q9HCI7 577 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 DCAF13Q9NV06 445 aaKnown RBP11.65□□□□□ -0.54
SPCS3-204ENST00000513139 MAGEL2Q9UJ55 1249 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 BAG5Q9UL15 447 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 V9GYQ6 96 aa11.65□□□□□ -0.54
SPCS3-204ENST00000513139 LOC100509620A0A075B734 347 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 IFNL4K9M1U5 179 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 ACOT8O14734 319 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 RNF13O43567 381 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 GDI2P50395 445 aaKnown RBP11.64□□□□□ -0.55
SPCS3-204ENST00000513139 CLRN1P58418 232 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 MRPS34P82930 218 aaKnown RBP11.64□□□□□ -0.55
SPCS3-204ENST00000513139 MELKQ14680 651 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 ZNF620Q6ZNG0 422 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 ASRGL1Q7L266 308 aa11.64□□□□□ -0.55
SPCS3-204ENST00000513139 TSPYL5Q86VY4 417 aaPredicted RBP11.64□□□□□ -0.55
SPCS3-204ENST00000513139 ABHD4Q8TB40 342 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms