RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RAB5CP51148 216 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 CLDN12P56749 244 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 HBA1P69905 142 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 HSF1Q00613 529 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 REEP5Q00765 189 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 Q499Y3 187 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 ZNF766Q5HY98 468 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 TMEM240Q5SV17 173 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 VASH2Q86V25 355 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 LRRC56Q8IYG6 542 aaPredicted RBP5.28□□□□□ -1.56
USP38-203ENST00000511739 OR13J1Q8NGT2 312 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 EDARADDQ8WWZ3 215 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 QRSL1Q9H0R6 528 aaKnown RBP5.28□□□□□ -1.56
USP38-203ENST00000511739 RAB18Q9NP72 206 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 KLK4Q9Y5K2 254 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 KIAA1217Q5T5P2 1943 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 HAX1O00165 279 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 CDX4O14627 284 aaPredicted RBP5.28□□□□□ -1.56
USP38-203ENST00000511739 CDC14BO60729 498 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 NME2P22392 152 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 TMEM52BQ4KMG9 183 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 ZNF789Q5FWF6 425 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 SFXN4Q6P4A7 337 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 DTWD1Q8N5C7 304 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 PNPLA1Q8N8W4 532 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 OR2A14Q96R47 310 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 ATP5SQ99766 215 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 NIPSNAP3BQ9BS92 247 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 KIR3DX1Q9H7L2 352 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 HINT3Q9NQE9 182 aaKnown RBP5.28□□□□□ -1.56
USP38-203ENST00000511739 SLC35D1Q9NTN3 355 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 LHX3Q9UBR4 397 aa5.28□□□□□ -1.56
USP38-203ENST00000511739 NME4O00746 187 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MYF6P23409 242 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 EVI2BP34910 448 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 GMPRP36959 345 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 PTTG1IPP53801 180 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SNRPGP62308 76 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 ALKBH1Q13686 389 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 MBOAT2Q6ZWT7 520 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZNF534Q76KX8 674 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MDGA2Q7Z553 956 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 PRSS35Q8N3Z0 413 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ARHGEF39Q8N4T4 335 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 HSD17B11Q8NBQ5 300 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 UBTD2Q8WUN7 234 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ITPKCQ96DU7 683 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SEC22AQ96IW7 307 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ASB16Q96NS5 453 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 OR51I2Q9H344 312 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 DCAF13Q9NV06 445 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 MAP1BP46821 2468 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 KRBOX1C9JBD0 128 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 TNFSF11O14788 317 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 T-ENOLP0DO92 83 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 GLULP15104 373 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZNF83P51522 516 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 CCR5P51681 352 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 RPL27P61353 136 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 CDK5R2Q13319 367 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 HLA-BQ31612 363 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SPANXN5Q5MJ07 72 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MZB1Q8WU39 189 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SLC22A12Q96S37 553 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 EMC7Q9NPA0 242 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 CLCF1Q9UBD9 225 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 YTHDF2Q9Y5A9 579 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 V9GYS6 101 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 M0R082 166 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 GABRPO00591 440 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MRPS14O60783 128 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 CALCBP10092 127 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 NPY4RP50391 375 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 PRDX4Q13162 271 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 TRIP6Q15654 476 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 SOHLH1Q5JUK2 328 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 GLYATL3Q5SZD4 288 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 PXDC1Q5TGL8 231 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 TMEM108Q6UXF1 575 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZNF788Q6ZQV5 615 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 LHFPL2Q6ZUX7 228 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 RFPL4BQ6ZWI9 263 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ANKRD13BQ86YJ7 626 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 ZDHHC23Q8IYP9 409 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MORN4Q8NDC4 146 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 OR10P1Q8NGE3 313 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 CCL17Q92583 94 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 CHRDL1Q9BU40 450 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MMP28Q9H239 520 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 CHST8Q9H2A9 424 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 LTB4R2Q9NPC1 389 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 NRIP3Q9NQ35 241 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SDR39U1Q9NRG7 319 aaPredicted RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 MED17Q9NVC6 651 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 GPR55Q9Y2T6 319 aaPredicted RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 PCDHGA9Q9Y5G4 932 aaKnown RBP5.27□□□□□ -1.57
USP38-203ENST00000511739 M0R135 149 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 MT-ND4LP03901 98 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 SCGB1C2P0DMR2 95 aa5.27□□□□□ -1.57
USP38-203ENST00000511739 COX6B1P14854 86 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms