RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 HNRNPA0Q13151 305 aaKnown RBP13.01□□□□□ -0.33
TPM3-219ENST00000509409 AQP6Q13520 282 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 KRR1Q13601 381 aaKnown RBP13.01□□□□□ -0.33
TPM3-219ENST00000509409 KRT72Q14CN4 511 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 GPR139Q6DWJ6 353 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 VASH1Q7L8A9 365 aaPredicted RBP13.01□□□□□ -0.33
TPM3-219ENST00000509409 FAM122BQ7Z309 247 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 GLB1L2Q8IW92 636 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 ATG16L2Q8NAA4 619 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 FAM156AQ8NDB6 213 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 SLC7A13Q8TCU3 470 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 SLC7A6Q92536 515 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 COG8Q96MW5 612 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 SLC6A7Q99884 636 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 SYT4Q9H2B2 425 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 CCDC134Q9H6E4 229 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 KRCC1Q9NPI7 259 aaPredicted RBP13.01□□□□□ -0.33
TPM3-219ENST00000509409 DCAF16Q9NXF7 216 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 IL20RAQ9UHF4 553 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 POLR1DQ9Y2S0 133 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 SOCS2O14508 198 aa13□□□□□ -0.33
TPM3-219ENST00000509409 RHCEP18577 417 aa13□□□□□ -0.33
TPM3-219ENST00000509409 KITLGP21583 273 aa13□□□□□ -0.33
TPM3-219ENST00000509409 SDHAP31040 664 aa13□□□□□ -0.33
TPM3-219ENST00000509409 RBMXP38159 391 aaKnown RBP13□□□□□ -0.33
TPM3-219ENST00000509409 PSME3P61289 254 aa13□□□□□ -0.33
TPM3-219ENST00000509409 LSM6P62312 80 aaKnown RBP13□□□□□ -0.33
TPM3-219ENST00000509409 GLYATQ6IB77 296 aa13□□□□□ -0.33
TPM3-219ENST00000509409 HACD2Q6Y1H2 254 aa13□□□□□ -0.33
TPM3-219ENST00000509409 ZSCAN2Q7Z7L9 614 aaPredicted RBP13□□□□□ -0.33
TPM3-219ENST00000509409 OR5AS1Q8N127 324 aa13□□□□□ -0.33
TPM3-219ENST00000509409 KLHL36Q8N4N3 616 aa13□□□□□ -0.33
TPM3-219ENST00000509409 SPICQ8N5J4 248 aa13□□□□□ -0.33
TPM3-219ENST00000509409 C3orf56Q8N813 242 aa13□□□□□ -0.33
TPM3-219ENST00000509409 OR52J3Q8NH60 311 aa13□□□□□ -0.33
TPM3-219ENST00000509409 OR1F12Q8NHA8 337 aa13□□□□□ -0.33
TPM3-219ENST00000509409 FAM216AQ8WUB2 273 aa13□□□□□ -0.33
TPM3-219ENST00000509409 ITLN1Q8WWA0 313 aa13□□□□□ -0.33
TPM3-219ENST00000509409 HAVCR1Q96D42 359 aa13□□□□□ -0.33
TPM3-219ENST00000509409 RBM4Q9BWF3 364 aaKnown RBP13□□□□□ -0.33
TPM3-219ENST00000509409 ASH2LQ9UBL3 628 aa13□□□□□ -0.33
TPM3-219ENST00000509409 PPP1R3CQ9UQK1 317 aa13□□□□□ -0.33
TPM3-219ENST00000509409 SIGLEC7Q9Y286 467 aa13□□□□□ -0.33
TPM3-219ENST00000509409 A0A1W2PRQ8 180 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 UNC119BA6NIH7 251 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 IMPA2O14732 288 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 IGHV2-70P01814 119 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 ZFP36P26651 326 aaKnown RBP12.99□□□□□ -0.33
TPM3-219ENST00000509409 MDH1P40925 334 aaKnown RBP12.99□□□□□ -0.33
TPM3-219ENST00000509409 RPS6KA3P51812 740 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 DGCR6Q14129 220 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 CCDC92Q53HC0 331 aaPredicted RBP12.99□□□□□ -0.33
TPM3-219ENST00000509409 C8orf82Q6P1X6 216 aaPredicted RBP12.99□□□□□ -0.33
TPM3-219ENST00000509409 DPY19L2P2Q6ZN68 376 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 Q6ZR03 302 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 TSEN54Q7Z6J9 526 aaKnown RBP12.99□□□□□ -0.33
TPM3-219ENST00000509409 OR5L1Q8NGL2 311 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 C22orf15Q8WYQ4 148 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 CMTM5Q96DZ9 223 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 RSRC1Q96IZ7 334 aaKnown RBP12.99□□□□□ -0.33
TPM3-219ENST00000509409 NUAK2Q9H093 628 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 NRIP3Q9NQ35 241 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 ZNF446Q9NWS9 450 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 PTTG3PQ9NZH4 202 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 ADA2Q9NZK5 511 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 VSX1Q9NZR4 365 aaPredicted RBP12.99□□□□□ -0.33
TPM3-219ENST00000509409 NDUFAF4Q9P032 175 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 IL19Q9UHD0 177 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 OPN4Q9UHM6 478 aa12.99□□□□□ -0.33
TPM3-219ENST00000509409 RER1O15258 196 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 DIRAS1O95057 198 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 DBHP09172 617 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 RAC2P15153 192 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 CDKN2AP42771 156 aaKnown RBP12.98□□□□□ -0.33
TPM3-219ENST00000509409 OMPP47874 163 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 LIMS1P48059 325 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 RGS6P49758 472 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 SLC27A4Q6P1M0 643 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 RBMS3Q6XE24 437 aaKnown RBP12.98□□□□□ -0.33
TPM3-219ENST00000509409 ADCK1Q86TW2 530 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 LRRC28Q86X40 367 aaPredicted RBP12.98□□□□□ -0.33
TPM3-219ENST00000509409 ZNF283Q8N7M2 679 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 OR2V2Q96R30 315 aa12.98□□□□□ -0.33
TPM3-219ENST00000509409 ELAC2Q9BQ52 826 aaKnown RBP12.98□□□□□ -0.33
TPM3-219ENST00000509409 PATZ1Q9HBE1 687 aaKnown RBP12.98□□□□□ -0.33
TPM3-219ENST00000509409 SRA1Q9HD15 236 aaKnown RBP12.98□□□□□ -0.33
TPM3-219ENST00000509409 SAMD4AQ9UPU9 718 aaKnown RBP12.98□□□□□ -0.33
TPM3-219ENST00000509409 TRBV4-1A0A0J9YWV2 114 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 TMEM89A2RUT3 159 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 OR6C6A6NF89 314 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 GPANK1O95872 356 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 CRABP1P29762 137 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 ERFP50548 548 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 BTG1P62324 171 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 HLXQ14774 488 aaPredicted RBP12.97□□□□□ -0.33
TPM3-219ENST00000509409 SEC23BQ15437 767 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 TMEM155Q4W5P6 130 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 OR2T2Q6IF00 324 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 DNM1P34Q6PK57 102 aa12.97□□□□□ -0.33
TPM3-219ENST00000509409 SMARCD3Q6STE5 483 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms