RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 PLK3Q9H4B4 646 aa17.38■□□□□ 0.37
HOXC6-204ENST00000509328 HINT3Q9NQE9 182 aaKnown RBP17.38■□□□□ 0.37
HOXC6-204ENST00000509328 USE1Q9NZ43 259 aa17.38■□□□□ 0.37
HOXC6-204ENST00000509328 FBXO9Q9UK97 447 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-204ENST00000509328 COMMD3-BMI1R4GMX3 469 aa17.38■□□□□ 0.37
HOXC6-204ENST00000509328 PMF1-BGLAPU3KQ54 211 aa17.38■□□□□ 0.37
HOXC6-204ENST00000509328 EI24O14681 340 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 PRODHO43272 600 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 GLCEO94923 617 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 ALPLP05186 524 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 EPHA2P29317 976 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 WNT5AP41221 380 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 ENTPD1P49961 510 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 ATP5J2P56134 94 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 ELFN2Q5R3F8 820 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 SHEQ5VZ18 495 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 RGS7BPQ6MZT1 257 aaPredicted RBP17.37■□□□□ 0.37
HOXC6-204ENST00000509328 ARL9Q6T311 187 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 LYPD4Q6UWN0 246 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 SPNS3Q6ZMD2 512 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 C1orf174Q8IYL3 243 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 C4orf45Q96LM5 186 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 COQ7Q99807 217 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 C9orf16Q9BUW7 83 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 OR51V1Q9H2C8 321 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 WDR76Q9H967 626 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 GDF2Q9UK05 429 aaPredicted RBP17.37■□□□□ 0.37
HOXC6-204ENST00000509328 ORC6Q9Y5N6 252 aa17.37■□□□□ 0.37
HOXC6-204ENST00000509328 ANKRD65E5RJM6 399 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 H7C417 338 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 BAG2O95816 211 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 LCKP06239 509 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 EVX1P49640 407 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 ALDH3A2P51648 485 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 PCK2Q16822 640 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 TEX30Q5JUR7 227 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 C12orf73Q69YU5 71 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 PRSS57Q6UWY2 283 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 CFAP77Q6ZQR2 320 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 CXXC5Q7LFL8 322 aaKnown RBP17.36■□□□□ 0.37
HOXC6-204ENST00000509328 ZNF101Q8IZC7 436 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 CBR4Q8N4T8 237 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 OR1J1Q8NGS3 322 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 MRPL37Q9BZE1 423 aaKnown RBP17.36■□□□□ 0.37
HOXC6-204ENST00000509328 RIBC2Q9H4K1 309 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 ELOVL3Q9HB03 270 aa17.36■□□□□ 0.37
HOXC6-204ENST00000509328 TMEM129A0AVI4 362 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 ZNF593O00488 134 aaPredicted RBP17.35■□□□□ 0.37
HOXC6-204ENST00000509328 ABHD16AO95870 558 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 SPARCP09486 303 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 GSTT1P30711 240 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 ECH1Q13011 328 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 MSMPQ1L6U9 139 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 KLHL12Q53G59 568 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 SLC35D3Q5M8T2 416 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 Q5PR19 223 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 DCLRE1CQ96SD1 692 aaKnown RBP17.35■□□□□ 0.37
HOXC6-204ENST00000509328 INTS14Q96SY0 518 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 PITX2Q99697 317 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 DOK1Q99704 481 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 MARCH7Q9H992 704 aa17.35■□□□□ 0.37
HOXC6-204ENST00000509328 PRKYO43930 277 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 ZNF250P15622 560 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 SLC2A5P22732 501 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 POLR2IP36954 125 aaKnown RBP17.34■□□□□ 0.37
HOXC6-204ENST00000509328 RPS27P42677 84 aaKnown RBP17.34■□□□□ 0.37
HOXC6-204ENST00000509328 PPOXP50336 477 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 RAD23AP54725 363 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 ERVS71-1P61550 626 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 TMEM154Q6P9G4 183 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 RFPL4BQ6ZWI9 263 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 KRTAP1-3Q8IUG1 177 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 BBS1Q8NFJ9 593 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 ABHD4Q8TB40 342 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 IPCEF1Q8WWN9 437 aaPredicted RBP17.34■□□□□ 0.37
HOXC6-204ENST00000509328 SLC7A6Q92536 515 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 MAP6Q96JE9 813 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 ATF6BQ99941 703 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 SYT3Q9BQG1 590 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 BARX1Q9HBU1 254 aaPredicted RBP17.34■□□□□ 0.37
HOXC6-204ENST00000509328 PNRC2Q9NPJ4 139 aaKnown RBP17.34■□□□□ 0.37
HOXC6-204ENST00000509328 TBCCD1Q9NVR7 557 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 FZR1Q9UM11 496 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 GRIP1Q9Y3R0 1128 aa17.34■□□□□ 0.37
HOXC6-204ENST00000509328 MAP1AP78559 2803 aaPredicted RBP17.34■□□□□ 0.37
HOXC6-204ENST00000509328 CHD3Q12873 2000 aaKnown RBP17.33■□□□□ 0.37
HOXC6-204ENST00000509328 ERICH4A6NGS2 130 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 NGFP01138 241 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 IGHV4-39P01824 125 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 PSKH1P11801 424 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 SELENOVP59797 346 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 RPS7P62081 194 aaKnown RBP17.33■□□□□ 0.36
HOXC6-204ENST00000509328 PPP1CBP62140 327 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 EFNB1P98172 346 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 ZNF718Q3SXZ3 478 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 ZBTB49Q6ZSB9 765 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 DCXRQ7Z4W1 244 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 LRP11Q86VZ4 500 aa17.33■□□□□ 0.36
HOXC6-204ENST00000509328 ERI1Q8IV48 349 aaKnown RBP17.33■□□□□ 0.36
HOXC6-204ENST00000509328 TCEANCQ8N8B7 351 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms