RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MEPEQ9NQ76 525 aaPredicted RBP3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 CTPS2Q9NRF8 586 aa3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 Q9UF83 564 aa3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 C19orf25Q9UFG5 118 aaPredicted RBP3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 RSPH14Q9UHP6 348 aa3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF107Q9UII5 783 aaPredicted RBP3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 TMCO1Q9UM00 188 aa3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 NDRG2Q9UN36 371 aaKnown RBP3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 ACOT9Q9Y305 439 aa3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 CPQQ9Y646 472 aa3.57□□□□□ -1.84
SMARCA5-202ENST00000508573 COL22A1Q8NFW1 1626 aaPredicted RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 SNAPC4Q5SXM2 1469 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 NUP155O75694 1391 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 MTUS2Q5JR59 1369 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM272A0A1B0GTI8 110 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CDIPTO14735 213 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 KMOO15229 486 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 KLRC4O43908 158 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 SOX15O60248 233 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CDC40O60508 579 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 RAD1O60671 282 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 RAMP1O60894 148 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CDK2AP2O75956 126 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 GAS8-AS1O95177 125 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 IGHV2-5P01817 119 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 IFNA16P05015 189 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 SERPINB2P05120 415 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ISG15P05161 165 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CCDC166P0CW27 439 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 SLC2A1P11166 492 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 UCHL3P15374 230 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CD36P16671 472 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF17P17021 662 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CA6P23280 308 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 MPIP34949 423 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 PTGDSP41222 190 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 MAGEA12P43365 314 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ZFP36L2P47974 494 aaKnown RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 RASSF2P50749 326 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CDK9P50750 372 aaKnown RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 P2RY4P51582 365 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 STC1P52823 247 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 FGF8P55075 233 aaPredicted RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 LIM2P55344 173 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ARL16Q0P5N6 197 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ILF3Q12906 894 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 KRR1Q13601 381 aaKnown RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM187Q14656 261 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CCDC6Q16204 474 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 TBC1D28Q2M2D7 210 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 SPIN4Q56A73 249 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CPTPQ5TA50 214 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 OR52E8Q6IFG1 317 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 BBS7Q8IWZ6 715 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 NRMQ8IXM6 262 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 OR6V1Q8N148 313 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF843Q8N446 348 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM199Q8N511 208 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 MCOLN3Q8TDD5 553 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 APOBEC4Q8WW27 367 aaKnown RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CRYGNQ8WXF5 182 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 DNASE2BQ8WZ79 361 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 MOCOSQ96EN8 888 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 MS4A14Q96JA4 679 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ADGRG7Q96K78 797 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 KCTD7Q96MP8 289 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 COL21A1Q96P44 957 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM208Q9BTX3 173 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 UGT2B28Q9BY64 529 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CHIAQ9BZP6 476 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 UBXN6Q9BZV1 441 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 NXF2Q9GZY0 626 aaKnown RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CSTL1Q9H114 145 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 OR51B5Q9H339 312 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 PARVBQ9HBI1 364 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ADGRL4Q9HBW9 690 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 TIGARQ9NQ88 270 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 IMPAD1Q9NX62 359 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 IL17CQ9P0M4 197 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 PAK5Q9P286 719 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 GNPTGQ9UJJ9 305 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ARL2BPQ9Y2Y0 163 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 NDUFAF1Q9Y375 327 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 ARL5AQ9Y689 179 aa3.56□□□□□ -1.84
SMARCA5-202ENST00000508573 NUP160Q12769 1436 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 IGLV3-22A0A075B6J6 115 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 PRR23AA6NEV1 266 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF724A8MTY0 619 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 TCP10L2B9ZVM9 353 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 NEDD8-MDP1E9PL57 170 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 DFFAO00273 331 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 KPNA3O00505 521 aaPredicted RBP3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 AZIN1O14977 448 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 PHF1O43189 567 aaPredicted RBP3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF749O43361 778 aa3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 DUSP11O75319 330 aaKnown RBP3.55□□□□□ -1.84
SMARCA5-202ENST00000508573 EEDO75530 441 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms