RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TIMP2P16035 220 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 HRH1P35367 487 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 KIR2DS4P43632 304 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 GSK3AP49840 483 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 RAB38P57729 211 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 GRB2P62993 217 aaKnown RBP6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 POU3F1Q03052 451 aaPredicted RBP6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 DUSP8Q13202 625 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 NOGQ13253 232 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF345Q14585 488 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 KIR2DS1Q14954 304 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 CNKSR3Q6P9H4 555 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 PRSS54Q6PEW0 395 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 MOB3CQ70IA8 216 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 DOK3Q7L591 496 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 MISPQ8IVT2 679 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 LMNTD1Q8N9Z9 388 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 NECAP1Q8NC96 275 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 OR51A2Q8NGJ7 313 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 MARCH1Q8TCQ1 289 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 FOXJ1Q92949 421 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 MS4A10Q96PG2 267 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 ARHGDIGQ99819 225 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF2Q9BSG1 426 aaPredicted RBP6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 JAM3Q9BX67 310 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 GPR87Q9BY21 358 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 ULBP3Q9BZM4 244 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 NXF5Q9H1B4 397 aaKnown RBP6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 MIXL1Q9H2W2 232 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 SLC23A2Q9UGH3 650 aa6.69□□□□□ -1.34
UBE2D3-224ENST00000508474 A0A1W2PQU0 124 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PPP1CBP62140 327 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 HTRA3P83110 453 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 IL10RAQ13651 578 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 INPP5JQ15735 1006 aaPredicted RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 AWAT1Q58HT5 328 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF684Q5T5D7 378 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 CPEB2Q7Z5Q1 589 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF595Q8IYB9 648 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF611Q8N823 705 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PINX1Q96BK5 328 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 RASD2Q96D21 266 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 MEGF10Q96KG7 1140 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 SMIM14Q96QK8 99 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 CHRDL1Q9BU40 450 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 WSB1Q9Y6I7 421 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 RICTORQ6R327 1708 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 LOC107986453A0A1B0GWG9 222 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 ZC3H12DA2A288 527 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 MFSD2BA6NFX1 497 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 HEPACAM2A8MVW5 462 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 H7C1C5 153 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 OR7C1O76099 320 aaPredicted RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 HOXB2P14652 356 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 FPR2P25090 351 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PTGER1P34995 402 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 KRTDAPP60985 99 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PPIAP62937 165 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 HABP2Q14520 560 aaPredicted RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF79Q15937 498 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PHLDA2Q53GA4 152 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 C2orf27AQ580R0 203 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 NCMAPQ5T1S8 102 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 TP53I13Q8NBR0 393 aaPredicted RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 SLC38A9Q8NBW4 561 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 TAAR9Q96RI9 348 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 FAM103A1Q9BTL3 118 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 LPAR3Q9UBY5 353 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PCDHGA1Q9Y5H4 931 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 MMP24Q9Y5R2 645 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 MPTX1A8MV57 137 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 LIMS3P0CW19 117 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 LIMS4P0CW20 117 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PTHLHP12272 177 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 FOXO1Q12778 655 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 DHRS2Q13268 280 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 NSDHLQ15738 373 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 PLA1AQ53H76 456 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 ZNF385BQ569K4 471 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 OR2B11Q5JQS5 317 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 HTR3DQ70Z44 454 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 KDF1Q8NAX2 398 aaPredicted RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 IL1F10Q8WWZ1 152 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 KLHDC7BQ96G42 594 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 DERL3Q96Q80 235 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 SHARPINQ9H0F6 387 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 GHRLQ9UBU3 117 aa6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 NXT1Q9UKK6 140 aaKnown RBP6.68□□□□□ -1.34
UBE2D3-224ENST00000508474 A0A087WV62 115 aa6.67□□□□□ -1.34
UBE2D3-224ENST00000508474 PLPP1O14494 284 aa6.67□□□□□ -1.34
UBE2D3-224ENST00000508474 GALR3O60755 368 aaPredicted RBP6.67□□□□□ -1.34
UBE2D3-224ENST00000508474 CTSAP10619 480 aa6.67□□□□□ -1.34
UBE2D3-224ENST00000508474 HIST1H1CP16403 213 aaKnown RBP6.67□□□□□ -1.34
UBE2D3-224ENST00000508474 PYCR3Q53H96 274 aa6.67□□□□□ -1.34
UBE2D3-224ENST00000508474 ABI3BPQ7Z7G0 1075 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms