RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ASB17Q8WXJ9 295 aa12.93□□□□□ -0.34
DDX41-208ENST00000507955 FAM3DQ96BQ1 224 aa12.93□□□□□ -0.34
DDX41-208ENST00000507955 WBP1Q96G27 269 aa12.93□□□□□ -0.34
DDX41-208ENST00000507955 SLC25A44Q96H78 314 aaPredicted RBP12.93□□□□□ -0.34
DDX41-208ENST00000507955 SEC61A2Q9H9S3 476 aa12.93□□□□□ -0.34
DDX41-208ENST00000507955 ZNF69Q9UC07 566 aa12.93□□□□□ -0.34
DDX41-208ENST00000507955 KCNN3Q9UGI6 736 aa12.93□□□□□ -0.34
DDX41-208ENST00000507955 LOC400499M0QZD8 3231 aa12.93□□□□□ -0.34
DDX41-208ENST00000507955 M0R233 179 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 CTAG2O75638 210 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 RGS11O94810 467 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 ECDO95905 644 aaPredicted RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 CCDC157Q569K6 752 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 MRPL14Q6P1L8 145 aaKnown RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 IDO2Q6ZQW0 420 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 OR5L2Q8NGL0 311 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 OR8S1Q8NH09 359 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 C11orf40Q8WZ69 217 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 G6PC2Q9NQR9 355 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 EMC3Q9P0I2 261 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 A0A1W2PPL8 197 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 PRAF2O60831 178 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 GLSO94925 669 aaPredicted RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 RAB40ALP0C0E4 278 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 SLC2A1P11166 492 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 TMEM176BQ3YBM2 270 aaPredicted RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 CHMP1BQ7LBR1 199 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 OR13C3Q8NGS6 347 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 RAB40AQ8WXH6 277 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 MR1Q95460 341 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 GNRHR2Q96P88 292 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 SOX7Q9BT81 388 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 PRRC2CQ9Y520 2896 aaKnown RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 TMEM272A0A1B0GTI8 110 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 LOC107986453A0A1B0GWG9 222 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 PLSCR5A0PG75 271 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 SRSF10O75494 262 aaKnown RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 RRASP10301 218 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 POU3F2P20265 443 aaPredicted RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 PTGS2P35354 604 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 CLDN6P56747 220 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 OPCMLQ14982 345 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 MFSD13AQ14CX5 517 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 C2orf68Q2NKX9 166 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 PCGF3Q3KNV8 242 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 FDX2Q6P4F2 183 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 RNF144BQ7Z419 303 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 UXS1Q8NBZ7 420 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 RADILQ96JH8 1075 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 ATG5Q9H1Y0 275 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 OR52A1Q9UKL2 312 aa12.92□□□□□ -0.34
DDX41-208ENST00000507955 PTRH2Q9Y3E5 179 aaKnown RBP12.92□□□□□ -0.34
DDX41-208ENST00000507955 NAP1L6A6NFF2 107 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 PYCARD-AS1I3L0S3 204 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 ZNF432O94892 652 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 UMODP07911 640 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 VSIG10L2P0DP72 767 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 M6PRP20645 277 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 DAP3P51398 398 aaKnown RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 MAML2Q8IZL2 1156 aaPredicted RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 JAGN1Q8N5M9 183 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 OR10S1Q8NGN2 331 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 SPACA9Q96E40 222 aaPredicted RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 ELMOD3Q96FG2 381 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 CYYR1Q96J86 154 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 JSRP1Q96MG2 331 aaPredicted RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 SFXN2Q96NB2 322 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 CMKLR1Q99788 373 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 KLHL13Q9P2N7 655 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 AHCTF1Q8WYP5 2266 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 IGHV3-15A0A0B4J1V0 119 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 OR2M5A3KFT3 312 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 GGT3PA6NGU5 568 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 B8ZZF3 427 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 XRCC3O43542 346 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 AP3S2P59780 193 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 UBE2MP61081 183 aaKnown RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 PCOLCEQ15113 449 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 TRIM61Q5EBN2 209 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 SFRP5Q5T4F7 317 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 TCEAL6Q6IPX3 200 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 CFAP77Q6ZQR2 320 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 OR2M3Q8NG83 312 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 TCEAL3Q969E4 200 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 NKD1Q969G9 470 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 AKAP7Q9P0M2 348 aaPredicted RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 SPEF1Q9Y4P9 236 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 MAB21L2Q9Y586 359 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 CHCHD2Q9Y6H1 151 aaPredicted RBP12.91□□□□□ -0.34
DDX41-208ENST00000507955 R4GMQ9 66 aa12.91□□□□□ -0.34
DDX41-208ENST00000507955 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 PMS2P1A4D2B8 440 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 ACOT7O00154 380 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 SULT1B1O43704 296 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 NDUFB6O95139 128 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 H2BFMP0C1H6 154 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 DHODHQ02127 395 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms