RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ELOVL3Q9HB03 270 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 NPAP1Q9NZP6 1156 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 POU2F3Q9UKI9 436 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 ZNF503-AS2A6NEH8 195 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 DPRXA6NFQ7 191 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 ZNF878C9JN71 531 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 ABCD4O14678 606 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 SELENOFO60613 162 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 MRPL3P09001 348 aaKnown RBP17.44■□□□□ 0.38
USP53-203ENST00000507597 MYF6P23409 242 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 GRB2P62993 217 aaKnown RBP17.44■□□□□ 0.38
USP53-203ENST00000507597 RAB40BQ12829 278 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 CDK5R2Q13319 367 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 ZNF774Q6NX45 483 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 TMEM154Q6P9G4 183 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 CORO6Q6QEF8 472 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 DEGS2Q6QHC5 323 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 SLC22A25Q6T423 547 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 VASH1Q7L8A9 365 aaPredicted RBP17.44■□□□□ 0.38
USP53-203ENST00000507597 SLC35F2Q8IXU6 374 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 COG8Q96MW5 612 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 ZNF75AQ96N20 296 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 ATF6BQ99941 703 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 NIPAL2Q9H841 368 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 CENPMQ9NSP4 180 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 SCN3BQ9NY72 215 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 TENM4Q6N022 2769 aa17.44■□□□□ 0.38
USP53-203ENST00000507597 DEFB108AA8MXU0 73 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 DBTP11182 482 aaKnown RBP17.43■□□□□ 0.38
USP53-203ENST00000507597 CCNOP22674 350 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 APEX1P27695 318 aaKnown RBP17.43■□□□□ 0.38
USP53-203ENST00000507597 RAD52P43351 418 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 RGS6P49758 472 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 TPTEP56180 551 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 CXCR4P61073 352 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 RPS23P62266 143 aaKnown RBP17.43■□□□□ 0.38
USP53-203ENST00000507597 CCDC92Q53HC0 331 aaPredicted RBP17.43■□□□□ 0.38
USP53-203ENST00000507597 LYPD4Q6UWN0 246 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 B3GLCTQ6Y288 498 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 CDC20BQ86Y33 519 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 SLAMF6Q96DU3 332 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 COPS4Q9BT78 406 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 ABHD6Q9BV23 337 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 MROQ9BYG7 248 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 ADGRL4Q9HBW9 690 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 MRPS18AQ9NVS2 196 aaKnown RBP17.43■□□□□ 0.38
USP53-203ENST00000507597 EDARQ9UNE0 448 aa17.43■□□□□ 0.38
USP53-203ENST00000507597 C5orf49A4QMS7 147 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 SYNGR3O43761 229 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 ZNF254O75437 659 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 GNAO1P09471 354 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 H2BFMP0C1H6 154 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 ALOX5APP20292 161 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 TUBG1P23258 451 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 HSD11B1P28845 292 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 PCSK6P29122 969 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 ZNF91Q05481 1191 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 KRT77Q7Z794 578 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 CPEB3Q8NE35 698 aaKnown RBP17.42■□□□□ 0.38
USP53-203ENST00000507597 CNIH3Q8TBE1 160 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 MARVELD3Q96A59 401 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 POM121L2Q96KW2 1035 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 BCL2L14Q9BZR8 327 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 NOX3Q9HBY0 568 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 TUBG2Q9NRH3 451 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 INPP5EQ9NRR6 644 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 PLCXD1Q9NUJ7 323 aa17.42■□□□□ 0.38
USP53-203ENST00000507597 CHCHD3Q9NX63 227 aaKnown RBP17.42■□□□□ 0.38
USP53-203ENST00000507597 EXOGQ9Y2C4 368 aaKnown RBP17.42■□□□□ 0.38
USP53-203ENST00000507597 IGHV2OR16-5A0A0B4J2B6 119 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 EFCAB10A6NFE3 127 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 J3QW42 95 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 COL8A1P27658 744 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 TLE4Q04727 773 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 EGR3Q06889 387 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 DBPQ10586 325 aaPredicted RBP17.41■□□□□ 0.38
USP53-203ENST00000507597 OTPQ5XKR4 325 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 CFAP77Q6ZQR2 320 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 EGFL6Q8IUX8 553 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 ZNF584Q8IVC4 421 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 ACBD7Q8N6N7 88 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 OR10H4Q8NGA5 316 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 OR5L1Q8NGL2 311 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 ST7LQ8TDW4 575 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 FBLIM1Q8WUP2 373 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 RNF133Q8WVZ7 376 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 APH1BQ8WW43 257 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 MS4A3Q96HJ5 214 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 CNBD2Q96M20 576 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 DDX28Q9NUL7 540 aaKnown RBP17.41■□□□□ 0.38
USP53-203ENST00000507597 BLOC1S6Q9UL45 172 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 TPRKBQ9Y3C4 175 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 ATP23Q9Y6H3 246 aa17.41■□□□□ 0.38
USP53-203ENST00000507597 DAPL1A0PJW8 107 aa17.4■□□□□ 0.38
USP53-203ENST00000507597 FAM221AA4D161 298 aa17.4■□□□□ 0.38
USP53-203ENST00000507597 DENRO43583 198 aaKnown RBP17.4■□□□□ 0.38
USP53-203ENST00000507597 WBP4O75554 376 aaKnown RBP17.4■□□□□ 0.38
USP53-203ENST00000507597 CTAG2O75638 210 aa17.4■□□□□ 0.38
USP53-203ENST00000507597 CELA3BP08861 270 aa17.4■□□□□ 0.38
USP53-203ENST00000507597 TACSTD2P09758 323 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms