RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 RERGLQ9H628 205 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 PATZ1Q9HBE1 687 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 MMP26Q9NRE1 261 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 ASH2LQ9UBL3 628 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 EGFL7Q9UHF1 273 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 TMEM5Q9Y2B1 443 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 STARD10Q9Y365 291 aa9.73□□□□□ -0.85
HMGCS1-204ENST00000507293 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 PPIAL4CA0A0B4J2A2 164 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SOCS2O14508 198 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 IMPA2O14732 288 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SPRY1O43609 319 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 AHCYL1O43865 530 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SLC16A7O60669 478 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 KHDRBS3O75525 346 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 NDUFB2O95178 105 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 COX4I1P13073 169 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 NCK1P16333 377 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 TUBG1P23258 451 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 FPR2P25090 351 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SDHAP31040 664 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 UBA52P62987 128 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 GUCY1A3Q02108 690 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 ZMYND11Q15326 602 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 TMEM155Q4W5P6 130 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 CCDC92Q53HC0 331 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 AWAT1Q58HT5 328 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 ARMCX4Q5H9R4 360 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 C8orf82Q6P1X6 216 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 TSEN54Q7Z6J9 526 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 OR5AS1Q8N127 324 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 KLHL36Q8N4N3 616 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SLC7A13Q8TCU3 470 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 DVL3Q92997 716 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 POP5Q969H6 163 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 FAM162AQ96A26 154 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 HAVCR1Q96D42 359 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SAMD8Q96LT4 415 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SIGLEC11Q96RL6 698 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 NMNAT1Q9HAN9 279 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 TUBG2Q9NRH3 451 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 PTTG3PQ9NZH4 202 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 PPP1R3CQ9UQK1 317 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 SIGLEC7Q9Y286 467 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 COA3Q9Y2R0 106 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 ENPP4Q9Y6X5 453 aa9.72□□□□□ -0.85
HMGCS1-204ENST00000507293 TENM1Q9UKZ4 2725 aa9.71□□□□□ -0.85
HMGCS1-204ENST00000507293 OR6C6A6NF89 314 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 F5H0A9 414 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 TRAPPC2LH3BP13 241 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 SURF4O15260 269 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 H1F0P07305 194 aaKnown RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 DBHP09172 617 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF12P17014 697 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 EGR1P18146 543 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 SLC6A9P48067 706 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 NUDT2P50583 147 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 MMP16P51512 607 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 LSM6P62312 80 aaKnown RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF154Q13106 437 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 HLXQ14774 488 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 FGD3Q5JSP0 725 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 GPR139Q6DWJ6 353 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 LRRC28Q86X40 367 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 GLB1L2Q8IW92 636 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 SIGLECL1Q8N7X8 197 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 ATG16L2Q8NAA4 619 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 OR1F12Q8NHA8 337 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 PTP4A1Q93096 173 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 RSRC1Q96IZ7 334 aaKnown RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 COG8Q96MW5 612 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 OR2V2Q96R30 315 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 GPX7Q96SL4 187 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 HOPXQ9BPY8 73 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 KCTD14Q9BQ13 255 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 MRI1Q9BV20 369 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 NTN4Q9HB63 628 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 NRIP3Q9NQ35 241 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 DDX28Q9NUL7 540 aaKnown RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 VSX1Q9NZR4 365 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF69Q9UC07 566 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 IL19Q9UHD0 177 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 IL20RAQ9UHF4 553 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 POLR1DQ9Y2S0 133 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 POLR3KQ9Y2Y1 108 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 INSIG2Q9Y5U4 225 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 AUP1Q9Y679 476 aa9.71□□□□□ -0.86
HMGCS1-204ENST00000507293 DOCK11Q5JSL3 2073 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 A0A1W2PRQ8 180 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 CEACAM18A8MTB9 384 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 A8MXK9 166 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 TMEM178BH3BS89 294 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 RER1O15258 196 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 PTP4A3O75365 173 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 GPANK1O95872 356 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 RAC2P15153 192 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 MDH2P40926 338 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms