RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GCNT2Q8N0V5 402 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 OTOSQ8NHW6 89 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ZC3HAV1LQ96H79 300 aaKnown RBP12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ATF6BQ99941 703 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ACKR4Q9NPB9 350 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 UBE2J1Q9Y385 318 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-207ENST00000504761 A3GALT2U3KPV4 340 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 GOSR2O14653 212 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 GRB2P62993 217 aaKnown RBP12.67□□□□□ -0.38
TCOF1-207ENST00000504761 MDGA2Q7Z553 956 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 OR6M1Q8NGM8 313 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 PHYHIPQ92561 330 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ZFP64Q9NPA5 681 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 NUBP2Q9Y5Y2 271 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 TRAPPC2LH3BP13 241 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 TNFRSF10AO00220 468 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 BHLHE40O14503 412 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 ISXQ2M1V0 245 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 COMTD1Q86VU5 262 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 SLIRPQ9GZT3 109 aaKnown RBP12.66□□□□□ -0.38
TCOF1-207ENST00000504761 DNTTIP1Q9H147 329 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 METTL9Q9H1A3 318 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 FBXO4Q9UKT5 387 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 A0A087WZY1 265 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 SULT1C4O75897 302 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 SCGNO76038 276 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 PATE4P0C8F1 98 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 DGCR2P98153 550 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 ARL6IP1Q15041 203 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 C6orf183Q5T699 404 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 PXKQ7Z7A4 578 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 CMSS1Q9BQ75 279 aaKnown RBP12.66□□□□□ -0.38
TCOF1-207ENST00000504761 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-207ENST00000504761 ITGB1BP2Q9UKP3 347 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 F5H0A9 414 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-207ENST00000504761 PRSS12P56730 875 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 EGR3Q06889 387 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 RIPPLY1Q0D2K3 151 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 PMPCAQ10713 525 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 STAC2Q6ZMT1 411 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 GALNT16Q8N428 558 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 KCNG3Q8TAE7 436 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 EHFQ9NZC4 300 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 GMEB1Q9Y692 573 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 COL6A6A6NMZ7 2263 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 TFP02787 698 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 TP53P04637 393 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-207ENST00000504761 ACHEP22303 614 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 CRYBB2P43320 205 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 AGFG1P52594 562 aaKnown RBP12.66□□□□□ -0.38
TCOF1-207ENST00000504761 CLN3Q13286 438 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 LAIR1Q6GTX8 287 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 LCN10Q6JVE6 187 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 SLC7A6Q92536 515 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 ISYNA1Q9NPH2 558 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 LRP12Q9Y561 859 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 PCDHGA5Q9Y5G8 931 aa12.66□□□□□ -0.38
TCOF1-207ENST00000504761 LOC100289279A0A1B0GTE1 492 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 SLC22A23A1A5C7 686 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 HMX3A6NHT5 357 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 IFITM5A6NNB3 132 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 PLPP3O14495 311 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 IFNA7P01567 189 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 EFNA3P52797 238 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 CRYBA2P53672 197 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 AIMP2Q13155 320 aaKnown RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 IDO2Q6ZQW0 420 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 OR52I2Q8NH67 350 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 FAM173AQ9BQD7 235 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 PBOV1Q9GZY1 135 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 IMPA2O14732 288 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 ARPC5O15511 151 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 EIF4EP06730 217 aaKnown RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 SP9P0CG40 484 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 ZNF121P58317 390 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 TAS2R19P59542 299 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 TGIF1Q15583 401 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 METTL11BQ5VVY1 283 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 ELMOD2Q8IZ81 293 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 OR8B4Q96RC9 309 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 PPIL3Q9H2H8 161 aaKnown RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 RANGRFQ9HD47 186 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 EXOSC3Q9NQT5 275 aaKnown RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 FBXO8Q9NRD0 319 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 CENPFP49454 3210 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 PCNTO95613 3336 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 NAP1L6A6NFF2 107 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 SLC33A1O00400 549 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 ZNF254O75437 659 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 PSMB1P20618 241 aaKnown RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 CDK2P24941 298 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 IL13RA1P78552 427 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 IL10RAQ13651 578 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 SHISA5Q8N114 240 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
TCOF1-207ENST00000504761 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms