RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 TBX5Q99593 518 aa12.12□□□□□ -0.47
DDR1-253ENST00000504651 ABHD6Q9BV23 337 aa12.12□□□□□ -0.47
DDR1-253ENST00000504651 TTTY10Q9BZA0 68 aa12.12□□□□□ -0.47
DDR1-253ENST00000504651 AMBNQ9NP70 447 aa12.12□□□□□ -0.47
DDR1-253ENST00000504651 ATPIF1Q9UII2 106 aa12.12□□□□□ -0.47
DDR1-253ENST00000504651 TMEM14AQ9Y6G1 99 aa12.12□□□□□ -0.47
DDR1-253ENST00000504651 SPTBN1Q01082 2364 aaKnown RBP12.11□□□□□ -0.47
DDR1-253ENST00000504651 PHYHO14832 338 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 SYNGR3O43761 229 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 FAM20BO75063 409 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 CCL2P13500 99 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 CCNOP22674 350 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 GDI2P50395 445 aaKnown RBP12.11□□□□□ -0.47
DDR1-253ENST00000504651 HCCSP53701 268 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 SPATC1Q76KD6 591 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 OR10H4Q8NGA5 316 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 OR4F15Q8NGB8 312 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 OR10S1Q8NGN2 331 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 OR1J2Q8NGS2 313 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 OR1F12Q8NHA8 337 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 LGALS12Q96DT0 336 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 RADILQ96JH8 1075 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 COQ7Q99807 217 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 ATF6BQ99941 703 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 COPS4Q9BT78 406 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 PNRC2Q9NPJ4 139 aaKnown RBP12.11□□□□□ -0.47
DDR1-253ENST00000504651 CENPMQ9NSP4 180 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 COPS3Q9UNS2 423 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 KLHDC2Q9Y2U9 406 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 RNF115Q9Y4L5 304 aa12.11□□□□□ -0.47
DDR1-253ENST00000504651 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
DDR1-253ENST00000504651 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 C5orf49A4QMS7 147 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 ATP6V1G2-DDX39BF2Z307 99 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 ALOX5APP20292 161 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 CALCRP30988 508 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 ACTC1P68032 377 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 ACTA1P68133 377 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 TAF13Q15543 124 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 SLC22A25Q6T423 547 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 RFLNBQ8N5W9 214 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 IL17RDQ8NFM7 739 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 BPIFB6Q8NFQ5 453 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 KBTBD8Q8NFY9 601 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 POM121L2Q96KW2 1035 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 AMELYQ99218 206 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 DDX28Q9NUL7 540 aaKnown RBP12.1□□□□□ -0.47
DDR1-253ENST00000504651 POU2F3Q9UKI9 436 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 PCDHGB1Q9Y5G3 927 aa12.1□□□□□ -0.47
DDR1-253ENST00000504651 DOPEY2Q9Y3R5 2298 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 LOC100509620A0A075B734 347 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 IRGMA1A4Y4 181 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 SLC1A7O00341 560 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 XPNPEP2O43895 674 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 FADS2O95864 444 aaKnown RBP12.09□□□□□ -0.47
DDR1-253ENST00000504651 H2BFMP0C1H6 154 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 OR2T7P0C7T2 308 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
DDR1-253ENST00000504651 HSD11B1P28845 292 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 CXCR4P61073 352 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 GRB2P62993 217 aaKnown RBP12.09□□□□□ -0.47
DDR1-253ENST00000504651 GALK2Q01415 458 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 RAB40BQ12829 278 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 ECH1Q13011 328 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 KLHL22Q53GT1 634 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 LAIR2Q6ISS4 152 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 KCTD18Q6PI47 426 aaPredicted RBP12.09□□□□□ -0.47
DDR1-253ENST00000504651 LRRN1Q6UXK5 716 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 ZNF704Q6ZNC4 412 aaPredicted RBP12.09□□□□□ -0.47
DDR1-253ENST00000504651 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 TMEM200AQ86VY9 491 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 PAQR4Q8N4S7 273 aaPredicted RBP12.09□□□□□ -0.47
DDR1-253ENST00000504651 OR52I1Q8NGK6 324 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 OR2T27Q8NH04 317 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 RNF133Q8WVZ7 376 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 ASB17Q8WXJ9 295 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 SLC7A6Q92536 515 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 IKZF2Q9UKS7 526 aa12.09□□□□□ -0.47
DDR1-253ENST00000504651 EXOGQ9Y2C4 368 aaKnown RBP12.09□□□□□ -0.47
DDR1-253ENST00000504651 DAPL1A0PJW8 107 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 EFCAB10A6NFE3 127 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 PSMD9O00233 223 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 DENRO43583 198 aaKnown RBP12.08□□□□□ -0.48
DDR1-253ENST00000504651 ABHD16AO95870 558 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 PLAUP00749 431 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 DBHP09172 617 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 ZNF35P13682 527 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 SLC15A1P46059 708 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 TLE4Q04727 773 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 SNTB2Q13425 540 aaKnown RBP12.08□□□□□ -0.48
DDR1-253ENST00000504651 C6orf141Q5SZD1 244 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 ZNF787Q6DD87 383 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 ZNF322Q6U7Q0 402 aaPredicted RBP12.08□□□□□ -0.48
DDR1-253ENST00000504651 AHSA2Q719I0 299 aa12.08□□□□□ -0.48
DDR1-253ENST00000504651 SSX6Q7RTT6 188 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms