RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TCRBV16S1A1N1A0A5B0 115 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 FAM166BA8MTA8 275 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 H0Y8G0 127 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 XRCC3O43542 346 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC25A12O75746 678 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SYNGR4O95473 234 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CHRM2P08172 466 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TACR3P29371 465 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 GRK4P32298 578 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PYCR1P32322 319 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TGFBR1P36897 503 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ADCYAP1R1P41586 468 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR2B8PP59922 312 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PRSS54Q6PEW0 395 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SCIMPQ6UWF3 145 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 LCTLQ6UWM7 567 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 FOXRED2Q8IWF2 684 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ACOT4Q8N9L9 421 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CLEC1AQ8NC01 280 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR2A1Q8NGT9 310 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ABHD4Q8TB40 342 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 UBE2FQ969M7 185 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NEURL3Q96EH8 262 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 WDR89Q96FK6 387 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CXorf58Q96LI9 332 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PRAP1Q96NZ9 151 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR2A5Q96R48 311 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NIPSNAP1Q9BPW8 284 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MRPL13Q9BYD1 178 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 C11orf1Q9H5F2 150 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SPACA1Q9HBV2 294 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PARD6AQ9NPB6 346 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ZFP30Q9Y2G7 519 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MRPS18BQ9Y676 258 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CENPVL1A0A0U1RR11 272 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 A0A1B0GTI1 187 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 A0A1W2PS29 197 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TBC1D3BA6NDS4 549 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 URADA6NGE7 173 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 FIGNL2A6NMB9 653 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MARCH11A6NNE9 402 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NCF1CA8MVU1 366 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SOX15O60248 233 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CYTIPO60759 359 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 DIRAS1O95057 198 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 DUS4LO95620 317 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CD5P06127 495 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 EPHX1P07099 455 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CD14P08571 375 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CST2P09228 141 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TBC1D3HP0C7X1 549 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 GABRR2P28476 465 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NBL1P41271 181 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 VEGFBP49765 207 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 GSK3AP49840 483 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NPY4RP50391 375 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ERVFC1-1P60608 527 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC10A7Q0GE19 358 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ABRAXAS2Q15018 415 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CYB5R2Q6BCY4 276 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TBC1D3GQ6DHY5 549 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RTL6Q6ICC9 239 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 STEAP1BQ6NZ63 245 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 FAM220AQ7Z4H9 259 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 GLT6D1Q7Z4J2 308 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC35E3Q7Z769 313 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 DEFB125Q8N687 156 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR2AP1Q8NGE2 309 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR5L2Q8NGL0 311 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR10D4PQ8NGN7 298 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SCAMP5Q8TAC9 235 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MS4A3Q96HJ5 214 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 AQP10Q96PS8 301 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SPIN2AQ99865 258 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SPIN2BQ9BPZ2 258 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RNF167Q9H6Y7 350 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 A4GALTQ9NPC4 353 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SPG21Q9NZD8 308 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MBD1Q9UIS9 605 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 EXOGQ9Y2C4 368 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 HIVEP1P15822 2718 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NUDT21O43809 227 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 IFNA1P01562 189 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TK1P04183 234 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ALPIP09923 528 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 P0C879 139 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ADRA2CP18825 462 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ELAVL4P26378 380 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ADORA2BP29275 332 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 BTCP35070 178 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CASRP41180 1078 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ACTR1BP42025 376 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CDKN2DP55273 166 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NTHL1P78549 312 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC17A1Q14916 467 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CDK5R1Q15078 307 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MED27Q6P2C8 311 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 DENND1CQ8IV53 801 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR56A1Q8NGH5 318 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MFSD8Q8NHS3 518 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms