RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RIIAD1A6NNX1 92 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 IFNGP01579 166 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 ALPLP05186 524 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 CST2P09228 141 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 ZNF3P17036 446 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 MSR1P21757 451 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 CCNOP22674 350 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 STOMP27105 288 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 PEX2P28328 305 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 LAP3P28838 519 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 UCP2P55851 309 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 GINS1Q14691 196 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 LRRC36Q1X8D7 754 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 UNQ6126/PRO20091Q6UXV3 157 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
NUP50-219ENST00000497960 OR52E2Q8NGJ4 325 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 C11orf40Q8WZ69 217 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 NMNAT3Q96T66 252 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 PRRG3Q9BZD7 231 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 OR51B6Q9H340 312 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 FN3KQ9H479 309 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 RERGLQ9H628 205 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 SLC25A19Q9HC21 320 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 VSX1Q9NZR4 365 aaPredicted RBP13.17□□□□□ -0.3
NUP50-219ENST00000497960 EIF3KQ9UBQ5 218 aaKnown RBP13.17□□□□□ -0.3
NUP50-219ENST00000497960 TIMM10BQ9Y5J6 103 aa13.17□□□□□ -0.3
NUP50-219ENST00000497960 C12orf71A8MTZ7 269 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 A8MV72 311 aaPredicted RBP13.16□□□□□ -0.3
NUP50-219ENST00000497960 CRLF1O75462 422 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 CDKN2AP42771 156 aaKnown RBP13.16□□□□□ -0.3
NUP50-219ENST00000497960 ALDH3B1P43353 468 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
NUP50-219ENST00000497960 PSG4Q00888 419 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 TMEM236Q5W0B7 351 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 LPCAT4Q643R3 524 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 CYB5R2Q6BCY4 276 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 LRP11Q86VZ4 500 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 ZNF786Q8N393 782 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 AKR7LQ8NHP1 331 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 SYNPRQ8TBG9 265 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 PLEKHA8Q96JA3 519 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 SNX18Q96RF0 628 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 GABARAPL3Q9BY60 117 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 OR2H1Q9GZK4 316 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 RPRD1BQ9NQG5 326 aaKnown RBP13.16□□□□□ -0.3
NUP50-219ENST00000497960 POLE4Q9NR33 117 aa13.16□□□□□ -0.3
NUP50-219ENST00000497960 C5orf49A4QMS7 147 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 GZMKP49863 264 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 KLF3P57682 345 aaPredicted RBP13.15□□□□□ -0.3
NUP50-219ENST00000497960 CDK5Q00535 292 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 SLC34A1Q06495 639 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 CRMP1Q14194 572 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 MAD2L1BPQ15013 274 aaPredicted RBP13.15□□□□□ -0.3
NUP50-219ENST00000497960 MOGQ16653 247 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 NKPD1Q17RQ9 610 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 CYB561A3Q8NBI2 242 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 SLC37A3Q8NCC5 494 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 SNX33Q8WV41 574 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 OTULINQ96BN8 352 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 POM121L2Q96KW2 1035 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 WACQ9BTA9 647 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 BPESC1Q9GZL8 116 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 VCXQ9H320 206 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 CMC2Q9NRP2 79 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 SLCO1C1Q9NYB5 712 aa13.15□□□□□ -0.3
NUP50-219ENST00000497960 MYEF2Q9P2K5 600 aaKnown RBP13.15□□□□□ -0.3
NUP50-219ENST00000497960 NKX1-2Q9UD57 310 aaPredicted RBP13.15□□□□□ -0.3
NUP50-219ENST00000497960 ZAR1LA6NP61 321 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 CASQ2O14958 399 aaPredicted RBP13.14□□□□□ -0.31
NUP50-219ENST00000497960 SLC16A7O60669 478 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 KHDRBS3O75525 346 aaKnown RBP13.14□□□□□ -0.31
NUP50-219ENST00000497960 HMGN1P05114 100 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 ZNF250P15622 560 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 CTLA4P16410 223 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 PAICSP22234 425 aaKnown RBP13.14□□□□□ -0.31
NUP50-219ENST00000497960 GIFP27352 417 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 CRABP1P29762 137 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 CENPAP49450 140 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 ERVS71-1P61550 626 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
NUP50-219ENST00000497960 PTGES3Q15185 160 aaKnown RBP13.14□□□□□ -0.31
NUP50-219ENST00000497960 ZIK1Q3SY52 487 aaPredicted RBP13.14□□□□□ -0.31
NUP50-219ENST00000497960 C6orf52Q5T4I8 152 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 ACSM5Q6NUN0 579 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 SYT9Q86SS6 491 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 GALNT4Q8N4A0 578 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 NPEPL1Q8NDH3 523 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 OR9Q1Q8NGQ5 310 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 OR1J1Q8NGS3 322 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 SLC29A1Q99808 456 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 ZNF416Q9BWM5 594 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 WNT5BQ9H1J7 359 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 TOR3AQ9H497 397 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 C8orf4Q9NR00 106 aa13.14□□□□□ -0.31
NUP50-219ENST00000497960 TAAR3PQ9P1P4 343 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms