RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 DNAJC8O75937 253 aaPredicted RBP13.71□□□□□ -0.21
VIM-208ENST00000497849 ZNF205O95201 554 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 CPT2P23786 658 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 AQP1P29972 269 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 GDI2P50395 445 aaKnown RBP13.71□□□□□ -0.21
VIM-208ENST00000497849 MMP16P51512 607 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 CDH12P55289 794 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 PSG4Q00888 419 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 SCARB2Q14108 478 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 DNAL1Q4LDG9 190 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 VAX1Q5SQQ9 334 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 UNQ6126/PRO20091Q6UXV3 157 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 ASRGL1Q7L266 308 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 C1orf174Q8IYL3 243 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 DEFB107AQ8IZN7 70 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 RNF148Q8N7C7 305 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 ZSCAN4Q8NAM6 433 aaPredicted RBP13.71□□□□□ -0.21
VIM-208ENST00000497849 OR2Z1Q8NG97 314 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 NABP1Q96AH0 204 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 SH3GL1Q99961 368 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 MRPL13Q9BYD1 178 aaKnown RBP13.71□□□□□ -0.21
VIM-208ENST00000497849 SIAEQ9HAT2 523 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 TMEM27Q9HBJ8 222 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 NDE1Q9NXR1 346 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 ADA2Q9NZK5 511 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 SELENONQ9NZV5 590 aa13.71□□□□□ -0.21
VIM-208ENST00000497849 C5orf58C9J3I9 102 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 ANKRD65E5RJM6 399 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 RNF13O43567 381 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 IGHG1P01857 330 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 OPN1MWP04001 364 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 OPN1MW2P0DN77 364 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 OPN1MW3P0DN78 364 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 ETS2P15036 469 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 CDAP32320 146 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 MSX2P35548 267 aaPredicted RBP13.7□□□□□ -0.22
VIM-208ENST00000497849 GSK3BP49841 420 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 ZNF84P51523 738 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 LOXL3P58215 753 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 CLRN1P58418 232 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 SLC27A4Q6P1M0 643 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 DHRS4L2Q6PKH6 230 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 C16orf89Q6UX73 402 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 LINC00114Q6XXX2 140 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 CDRT15Q96T59 188 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 SEPHS2Q99611 448 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 TMEM38AQ9H6F2 299 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 GCM1Q9NP62 436 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 CCNB1IP1Q9NPC3 277 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 MIOXQ9UGB7 285 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 IL19Q9UHD0 177 aa13.7□□□□□ -0.22
VIM-208ENST00000497849 PIP5K1CO60331 668 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 TNFSF4P23510 183 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 ZNF133P52736 654 aaPredicted RBP13.69□□□□□ -0.22
VIM-208ENST00000497849 MRPS34P82930 218 aaKnown RBP13.69□□□□□ -0.22
VIM-208ENST00000497849 ZNF74Q16587 644 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 VMACQ2NL98 169 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 C10orf128Q5T292 105 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 PGAM4Q8N0Y7 254 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 FAM156AQ8NDB6 213 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 TBC1D15Q8TC07 691 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 NEIL1Q96FI4 390 aaPredicted RBP13.69□□□□□ -0.22
VIM-208ENST00000497849 PLEKHA8Q96JA3 519 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 OR2V2Q96R30 315 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 ZNF607Q96SK3 696 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 TMEM246Q9BRR3 403 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 CDADC1Q9BWV3 514 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 KCNN2Q9H2S1 579 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 POFUT1Q9H488 388 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 C16orf95Q9H693 158 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 UGT2A1Q9Y4X1 527 aa13.69□□□□□ -0.22
VIM-208ENST00000497849 DNAH9Q9NYC9 4486 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 CENPVL3A0A0U1RRI6 287 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 PRORSD1PA6NEY8 169 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 CH25HO95992 272 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 SFTPBP07988 381 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 IER3P46695 156 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 RGS8P57771 180 aaPredicted RBP13.68□□□□□ -0.22
VIM-208ENST00000497849 ERVK-25P63136 954 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 SWT1Q5T5J6 900 aaKnown RBP13.68□□□□□ -0.22
VIM-208ENST00000497849 REEP3Q6NUK4 255 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 ARPINQ7Z6K5 226 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 ZER1Q7Z7L7 766 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 MICU2Q8IYU8 434 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 ARHGAP24Q8N264 748 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 C11orf65Q8NCR3 313 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 NOXO1Q8NFA2 376 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 ZNF420Q8TAQ5 688 aaPredicted RBP13.68□□□□□ -0.22
VIM-208ENST00000497849 C4orf45Q96LM5 186 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
VIM-208ENST00000497849 PCGF1Q9BSM1 259 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 WNT5BQ9H1J7 359 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 ABCD2Q9UBJ2 740 aa13.68□□□□□ -0.22
VIM-208ENST00000497849 IGKV1D-43A0A0B4J1Z2 117 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 FAM220BPB1ANY3 271 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 C22orf46C9J442 243 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 M0QX08 132 aa13.67□□□□□ -0.22
VIM-208ENST00000497849 GSC2O15499 205 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms