RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 MICU1Q9BPX6 476 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 TRIM51Q9BSJ1 452 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 API5Q9BZZ5 524 aaKnown RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 SP140LQ9H930 580 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 ABCC13Q9NSE7 274 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 TRMT112Q9UI30 125 aaKnown RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 ATPIF1Q9UII2 106 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 MGAT4AQ9UM21 535 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 PRELID1Q9Y255 219 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 CPQQ9Y646 472 aa4.94□□□□□ -1.62
BRCA1-224ENST00000497488 DDX60Q8IY21 1712 aaKnown RBP4.94□□□□□ -1.62
BRCA1-224ENST00000497488 IGHV3OR16-12A0A075B7B8 117 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 LYRM9A8MSI8 78 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 E9PLD3 99 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 MBTPS2O43462 519 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 PSIP1O75475 530 aaKnown RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 GPX5O75715 221 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 TIMP1P01033 207 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 HLA-GP17693 338 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 SLC2A5P22732 501 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 OPRL1P41146 370 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 MAGEA2P43356 314 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 RPL14P50914 215 aaKnown RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 GPM6AP51674 278 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 ACTA2P62736 377 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 ACTG2P63267 376 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 ACTC1P68032 377 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 ACTA1P68133 377 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 TAL2Q16559 108 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 SRSF7Q16629 238 aaKnown RBP eCLIP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 FER1L6Q2WGJ9 1857 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 C14orf28Q4W4Y0 310 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 ARMCX5Q6P1M9 558 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 LCLAT1Q6UWP7 414 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 TIAM2Q8IVF5 1701 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 PRR22Q8IZ63 422 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 VKORC1L1Q8N0U8 176 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 PUSL1Q8N0Z8 303 aaKnown RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 CIARTQ8N365 385 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF557Q8N988 423 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 OR6X1Q8NH79 312 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 NDRG1Q92597 394 aaKnown RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 B3GALT6Q96L58 329 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 FOXC2Q99958 501 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 KCTD14Q9BQ13 255 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 C9orf16Q9BUW7 83 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 CHIAQ9BZP6 476 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 DERL2Q9GZP9 239 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 UBE2ZQ9H832 354 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-224ENST00000497488 MOB1AQ9H8S9 216 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 SIAEQ9HAT2 523 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 B3GAT2Q9NPZ5 323 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 CTPS2Q9NRF8 586 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 CYB5R1Q9UHQ9 305 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 MMP17Q9ULZ9 603 aa4.93□□□□□ -1.62
BRCA1-224ENST00000497488 DUOX1Q9NRD9 1551 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 TRGV8A0A0C4DH27 118 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 TEX48A0A1B0GUV7 120 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 GPR171O14626 319 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 LALBAP00709 142 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 CRYABP02511 175 aaKnown RBP4.92□□□□□ -1.62
BRCA1-224ENST00000497488 CSNK2A2P19784 350 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-224ENST00000497488 HLA-DMAP28067 261 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 PPP1R2P41236 205 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 CDKN2CP42773 168 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 SERPINB8P50452 374 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 BIDP55957 195 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 CCL14Q16627 93 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 GOLGA7BQ2TAP0 167 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 ACTL10Q5JWF8 245 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 PPP1R2P3Q6NXS1 205 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 AHSA2Q719I0 299 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF677Q86XU0 584 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 FLVCR1-AS1Q8TAF5 88 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF564Q8TBZ8 553 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-224ENST00000497488 PHOSPHO2Q8TCD6 241 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 DNAJB3Q8WWF6 145 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 RORBQ92753 470 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 PPP1R14BQ96C90 147 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 DNAJC1Q96KC8 554 aaKnown RBP4.92□□□□□ -1.62
BRCA1-224ENST00000497488 CIB1Q99828 191 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 APOL2Q9BQE5 337 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 COPS4Q9BT78 406 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 DCUN1D5Q9BTE7 237 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF426Q9BUY5 554 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 C1orf109Q9NX04 203 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 VAPAQ9P0L0 249 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 TMEM181Q9P2C4 612 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 SPRR3Q9UBC9 169 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 ASIC3Q9UHC3 531 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 GNPTGQ9UJJ9 305 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 GOLT1BQ9Y3E0 138 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 MROH7Q68CQ1 1323 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 SBF1O95248 1867 aa4.92□□□□□ -1.62
BRCA1-224ENST00000497488 A0A087WW49 117 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 ERI2A8K979 691 aaKnown RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 HACD1B0YJ81 288 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 SMIM1B2RUZ4 78 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PLPP3O14495 311 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms