RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 OR6C6A6NF89 314 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 IGHV1-46P01743 117 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 CD55P08174 381 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 RGS6P49758 472 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 SLC3A1Q07837 685 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 CCNIQ14094 377 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 RPL13AP3Q6NVV1 102 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 USP51Q70EK9 711 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 GLCCI1Q86VQ1 547 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 GJC3Q8NFK1 279 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 TRIM15Q9C019 465 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 RERGLQ9H628 205 aa20.61■□□□□ 0.89
HLA-C-209ENST00000495835 B2RBV5 119 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 CLDN25C9JDP6 229 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 CDC14BO60729 498 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 PPP1R3DO95685 299 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 RENP00797 406 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 LMO4P61968 165 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 HIST1H3AP68431 136 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 GLO1Q04760 184 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 PSG7Q13046 419 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 TSTQ16762 297 aaKnown RBP20.6■□□□□ 0.89
HLA-C-209ENST00000495835 TMEM255AQ5JRV8 349 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 HIST2H3PS2Q5TEC6 136 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 HIST2H3AQ71DI3 136 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 JAZF1Q86VZ6 243 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 OR1F12Q8NHA8 337 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 RAB1CQ92928 201 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 PTP4A1Q93096 173 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 TIMD4Q96H15 378 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 B9D1Q9UPM9 204 aa20.6■□□□□ 0.89
HLA-C-209ENST00000495835 GAAP10253 952 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 KITLGP21583 273 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 MAGEA2P43356 314 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 CDK5R2Q13319 367 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 CCDC92Q53HC0 331 aaPredicted RBP20.59■□□□□ 0.89
HLA-C-209ENST00000495835 ZBTB46Q86UZ6 589 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 HAVCR1Q96D42 359 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 IFT27Q9BW83 186 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 HDHD2Q9H0R4 259 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 MAGIXQ9H6Y5 334 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 GRIP1Q9Y3R0 1128 aa20.59■□□□□ 0.89
HLA-C-209ENST00000495835 IGLV1-36A0A0B4J1U3 117 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 ZSCAN5BA6NJL1 495 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 RNF212BA8MTL3 300 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 PHF1O43189 567 aaPredicted RBP20.58■□□□□ 0.89
HLA-C-209ENST00000495835 SPRY3O43610 288 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 TIMM8AO60220 97 aaPredicted RBP20.58■□□□□ 0.89
HLA-C-209ENST00000495835 MPZL1O95297 269 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 FAM107AO95990 144 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 MSMBP08118 114 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 CALB2P22676 271 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 NOS3P29474 1203 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 SLC36A3Q495N2 470 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 LEG1Q6P5S2 330 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 OR6V1Q8N148 313 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 OR5L1Q8NGL2 311 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 GTF3AQ92664 365 aaKnown RBP20.58■□□□□ 0.89
HLA-C-209ENST00000495835 TMEM186Q96B77 213 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 RAB39BQ96DA2 213 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 COQ7Q99807 217 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 TREM2Q9NZC2 230 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 LYVE1Q9Y5Y7 322 aa20.58■□□□□ 0.89
HLA-C-209ENST00000495835 WNT9BO14905 357 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 RAC2P15153 192 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 HIST1H1CP16403 213 aaKnown RBP20.57■□□□□ 0.88
HLA-C-209ENST00000495835 COX10Q12887 443 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 TRIM25Q14258 630 aaKnown RBP20.57■□□□□ 0.88
HLA-C-209ENST00000495835 PGBD2Q6P3X8 592 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 ZNF620Q6ZNG0 422 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 OR51F2Q8NH61 342 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 SAMD8Q96LT4 415 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 TSSK2Q96PF2 358 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 NMNAT3Q96T66 252 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 NARFLQ9H6Q4 476 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 SRA1Q9HD15 236 aaKnown RBP20.57■□□□□ 0.88
HLA-C-209ENST00000495835 PURGQ9UJV8 347 aaKnown RBP20.57■□□□□ 0.88
HLA-C-209ENST00000495835 POLR1DQ9Y2S0 133 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 STARD10Q9Y365 291 aa20.57■□□□□ 0.88
HLA-C-209ENST00000495835 TANC2Q9HCD6 1990 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 TRAV20A0A0B4J274 112 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 FAM157AC9JC47 383 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 TNFRSF11BO00300 401 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 DCTN6O00399 190 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 RER1O15258 196 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 UBOX5O94941 541 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 TNFSF4P23510 183 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 LCN8Q6JVE9 175 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 ACSM5Q6NUN0 579 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 CYP2R1Q6VVX0 501 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 IL17RELQ6ZVW7 336 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 CCDC197Q8NCU1 140 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 SLC26A10Q8NG04 563 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 ZNF665Q9H7R5 613 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 IL20Q9NYY1 176 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 WIPI2Q9Y4P8 454 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 LHFPL6Q9Y693 200 aa20.56■□□□□ 0.88
HLA-C-209ENST00000495835 TNFRSF1AP19438 455 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 CENPAP49450 140 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 MVKQ03426 396 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms