RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CTLA4P16410 223 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 ZNF12P17014 697 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 BTG1P62324 171 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 SF3A3Q12874 501 aaKnown RBP eCLIP19.57■□□□□ 0.722e-7■■□□□ 11.5
COL27A1-208ENST00000494780 ZNF154Q13106 437 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 ZMYND11Q15326 602 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 ARMCX4Q5H9R4 360 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 CBLL1Q75N03 491 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 RRM2BQ7LG56 351 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 SLC15A3Q8IY34 581 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 ITLN1Q8WWA0 313 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 PTP4A1Q93096 173 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 ANKRD19PQ9H560 264 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 PLEK2Q9NYT0 353 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 GMPR2Q9P2T1 348 aaKnown RBP19.57■□□□□ 0.72
COL27A1-208ENST00000494780 NUP50Q9UKX7 468 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 TMEM5Q9Y2B1 443 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 PPIAL4AQ9Y536 164 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 AUP1Q9Y679 476 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 A8MXK9 166 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 TRAPPC2LH3BP13 241 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 J3QW42 95 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 H2AFXP16104 143 aaPredicted RBP19.56■□□□□ 0.72
COL27A1-208ENST00000494780 ZNF26P17031 533 aaPredicted RBP19.56■□□□□ 0.72
COL27A1-208ENST00000494780 LSM6P62312 80 aaKnown RBP19.56■□□□□ 0.72
COL27A1-208ENST00000494780 LIPEQ05469 1076 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 FKBP9P1Q75LS8 142 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 DOK3Q7L591 496 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 SIGLECL1Q8N7X8 197 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 RP9Q8TA86 221 aaKnown RBP19.56■□□□□ 0.72
COL27A1-208ENST00000494780 HSH2DQ96JZ2 352 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 SIGLEC11Q96RL6 698 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 GPA33Q99795 319 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 INSIG2Q9Y5U4 225 aa19.56■□□□□ 0.72
COL27A1-208ENST00000494780 OR6C6A6NF89 314 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 F5H0A9 414 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-208ENST00000494780 GSTA4O15217 222 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 RAC2P15153 192 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 RBMXP38159 391 aaKnown RBP19.55■□□□□ 0.72
COL27A1-208ENST00000494780 MDH2P40926 338 aaKnown RBP19.55■□□□□ 0.72
COL27A1-208ENST00000494780 GUCY1A3Q02108 690 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 FOXL1Q12952 345 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 GPR139Q6DWJ6 353 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 CYP4Z1Q86W10 505 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 MUC20Q8N307 709 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-208ENST00000494780 OR1F12Q8NHA8 337 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 MRI1Q9BV20 369 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 NMNAT1Q9HAN9 279 aaPredicted RBP19.55■□□□□ 0.72
COL27A1-208ENST00000494780 ASH2LQ9UBL3 628 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 ATPIF1Q9UII2 106 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 MGAM2Q2M2H8 2515 aa19.55■□□□□ 0.72
COL27A1-208ENST00000494780 IFNL4K9M1U5 179 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 KHDRBS3O75525 346 aaKnown RBP19.54■□□□□ 0.72
COL27A1-208ENST00000494780 SASH3O75995 380 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 NDUFB2O95178 105 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 HKR1P10072 659 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 CPT2P23786 658 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 RGS6P49758 472 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 SEC61A1P61619 476 aaKnown RBP19.54■□□□□ 0.72
COL27A1-208ENST00000494780 KRR1Q13601 381 aaKnown RBP19.54■□□□□ 0.72
COL27A1-208ENST00000494780 ESCO2Q56NI9 601 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 SLC27A4Q6P1M0 643 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 C1orf94Q6P1W5 598 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 GLB1L2Q8IW92 636 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 POU5F2Q8N7G0 328 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 SLC7A6Q92536 515 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 OR2V2Q96R30 315 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 ZNF747Q9BV97 191 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 SYT4Q9H2B2 425 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 ZMAT3Q9HA38 289 aaKnown RBP19.54■□□□□ 0.72
COL27A1-208ENST00000494780 VSX1Q9NZR4 365 aaPredicted RBP19.54■□□□□ 0.72
COL27A1-208ENST00000494780 ARMCX1Q9P291 453 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 ZNF69Q9UC07 566 aa19.54■□□□□ 0.72
COL27A1-208ENST00000494780 TMEM178BH3BS89 294 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 SLC16A7O60669 478 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 PTP4A3O75365 173 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 SERPINA1P01009 418 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 PRTN3P24158 256 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 SDHAP31040 664 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 ERFP50548 548 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 CCDC92Q53HC0 331 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-208ENST00000494780 KLF17Q5JT82 389 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-208ENST00000494780 SLC7A13Q8TCU3 470 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 RASD2Q96D21 266 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 FAM46AQ96IP4 442 aaKnown RBP19.53■□□□□ 0.72
COL27A1-208ENST00000494780 GPX7Q96SL4 187 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-208ENST00000494780 HOPXQ9BPY8 73 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-208ENST00000494780 GCM1Q9NP62 436 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 NRIP3Q9NQ35 241 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 OR5V1Q9UGF6 321 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 SIGLEC7Q9Y286 467 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 LRCH1Q9Y2L9 728 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 COA3Q9Y2R0 106 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-208ENST00000494780 ENPP4Q9Y6X5 453 aa19.53■□□□□ 0.72
COL27A1-208ENST00000494780 WIPF1O43516 503 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 MMP16P51512 607 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 SLC7A2P52569 658 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 FBXW12Q6X9E4 464 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 ADCK1Q86TW2 530 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 ATG16L2Q8NAA4 619 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms