RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 IGHV3-64DA0A0J9YX35 117 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 PEX7O00628 323 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 LSM1O15116 133 aaKnown RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 ERLIN1O75477 346 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 UPK3AO75631 287 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 PLEKP08567 350 aaPredicted RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 CRYBB2P43320 205 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 YAP1P46937 504 aaKnown RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 RFX3P48380 749 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 CCR8P51685 355 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 ZNF136P52737 540 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 LRRC63Q05C16 580 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 ECH1Q13011 328 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 PTGES3Q15185 160 aaKnown RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 SSX2Q16385 188 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 TMEM107Q6UX40 140 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 ERO1BQ86YB8 467 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 EID2Q8N6I1 236 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 CEP112Q8N8E3 955 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 OR52K2Q8NGK3 314 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 OR1S2Q8NGQ3 325 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 SLC2A14Q8TDB8 520 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 TMEM54Q969K7 222 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 LRRC58Q96CX6 371 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 ASB9Q96DX5 294 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 TPD52L3Q96J77 140 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 TAAR1Q96RJ0 339 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 PLIN2Q99541 437 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 CDX2Q99626 313 aaPredicted RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 CCDC77Q9BR77 488 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 CENPKQ9BS16 269 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 PKIBQ9C010 78 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 C11orf49Q9H6J7 331 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 TDRD3Q9H7E2 651 aaKnown RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 CD209Q9NNX6 404 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 CTPS2Q9NRF8 586 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 PSMC3IPQ9P2W1 217 aaPredicted RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 NUP50Q9UKX7 468 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 MRPS18BQ9Y676 258 aaKnown RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 PRUNE2Q8WUY3 3088 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 IGLV3-16A0A075B6K0 115 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 HEATR9A2RTY3 570 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 GOLGA8OA6NCC3 632 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 GOLGA8NF8WBI6 632 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 XKRYO14609 159 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 SOX15O60248 233 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 EIF3GO75821 320 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMC4-224ENST00000494612 ANXA5P08758 320 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 IGHV3-43DP0DP04 118 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 CALM1P0DP23 149 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 CALM2P0DP24 149 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 CALM3P0DP25 149 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 FOLR1P15328 257 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 AK4P27144 223 aaPredicted RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 PPOXP50336 477 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 ATP5IP56385 69 aaPredicted RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 GPX6P59796 221 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 NUTF2P61970 127 aaKnown RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 YWHAGP61981 247 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMC4-224ENST00000494612 MRPS22P82650 360 aaKnown RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 ZNF92Q03936 586 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 ARHGAP19Q14CB8 494 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 PPP1R7Q15435 360 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 COA6Q5JTJ3 125 aaKnown RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 TSPO2Q5TGU0 170 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 SLC25A48Q6ZT89 311 aaKnown RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 CDR2LQ86X02 465 aaPredicted RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 MREGQ8N565 214 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 MS4A15Q8N5U1 240 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 B3GNT7Q8NFL0 401 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 OR5B3Q8NH48 314 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 GIMAP1Q8WWP7 306 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 KIFAP3Q92845 792 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 ATP5SQ99766 215 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 SH3GL1Q99961 368 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 ECSITQ9BQ95 431 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 OSBPL10Q9BXB5 764 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 CWH43Q9H720 699 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 KCNJ16Q9NPI9 418 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 RBAKQ9NYW8 714 aaPredicted RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 LSM7Q9UK45 103 aaKnown RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 STARD10Q9Y365 291 aa2.81□□□□□ -1.96
SMC4-224ENST00000494612 LAMA2P24043 3122 aaKnown RBP2.81□□□□□ -1.96
SMC4-224ENST00000494612 AK9Q5TCS8 1911 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 A0A096LNJ9 63 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 RNF13O43567 381 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 ICOSLGO75144 302 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 NDUFB10O96000 172 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 SFTPCP11686 197 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 PRPS2P11908 318 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 RPS9P46781 194 aaKnown RBP2.8□□□□□ -1.96
SMC4-224ENST00000494612 ATP5OP48047 213 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 UGT2B15P54855 530 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 FKBP1AP62942 108 aaKnown RBP2.8□□□□□ -1.96
SMC4-224ENST00000494612 MRPL23Q16540 153 aaKnown RBP2.8□□□□□ -1.96
SMC4-224ENST00000494612 VPS26BQ4G0F5 336 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 PRAMEF20Q5VT98 475 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 ANKRD26P1Q6NSI1 321 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms