RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 IDH3GP51553 393 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 POLR2HP52434 150 aaKnown RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 RAD23AP54725 363 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 CLDN8P56748 225 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 UBE2NP61088 152 aaKnown RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 NAAAQ02083 359 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 FUT5Q11128 374 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 SYPL1Q16563 259 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 ATAD3BQ5T9A4 648 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 FAHD2BQ6P2I3 314 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 FRRS1Q6ZNA5 592 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 RNF165Q6ZSG1 346 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 SPATA21Q7Z572 469 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 MYPOPQ86VE0 399 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 MEX3DQ86XN8 651 aaKnown RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF786Q8N393 782 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 C17orf78Q8N4C9 275 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 NATD1Q8N6N6 113 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 C3orf56Q8N813 242 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 ANKFN1Q8N957 763 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 FAM71CQ8NEG0 241 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 MNS1Q8NEH6 495 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 OR9K2Q8NGE7 335 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 OR4A15Q8NGL6 344 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 OR1K1Q8NGR3 316 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 UBLCP1Q8WVY7 318 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 FAHD2AQ96GK7 314 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 SLC35G5Q96KT7 338 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 TPK1Q9H3S4 243 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 MYOZ1Q9NP98 299 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 HINT3Q9NQE9 182 aaKnown RBP4.41□□□□□ -1.7
PTCD3-219ENST00000494323 ADPRHL2Q9NX46 363 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 SLC17A7Q9P2U7 560 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 RNF7Q9UBF6 113 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 SLC35A3Q9Y2D2 325 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 WDR45Q9Y484 360 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 PKD1L1Q8TDX9 2849 aa4.41□□□□□ -1.7
PTCD3-219ENST00000494323 PRSS51A0A1B0GVH4 220 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 RPS10-NUDT3A0A1W2PQS6 291 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CFAP73A6NFT4 308 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF587BE7ETH6 402 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 HMGN4O00479 90 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF208O43345 1280 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 SPAG7O75391 227 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 NDUFB4O95168 129 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 AK1P00568 194 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 GPIP06744 558 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 IGFBP1P08833 259 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-219ENST00000494323 TACSTD2P09758 323 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 UQCRC2P22695 453 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CHI3L1P36222 383 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CAPZA2P47755 286 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 PPOXP50336 477 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 P2RX3P56373 397 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 NME5P56597 212 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 ACTG1P63261 375 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 EMX2Q04743 252 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 NPRL3Q12980 569 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 EFNB3Q15768 340 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 ODF3L2Q3SX64 289 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 XKR7Q5GH72 579 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 AP1ARQ63HQ0 302 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 NIPAL3Q6P499 406 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 PAQR6Q6TCH4 344 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CREB3L2Q70SY1 520 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 ABHD12BQ7Z5M8 362 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-219ENST00000494323 RNF130Q86XS8 419 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 EPHX4Q8IUS5 362 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CDK20Q8IZL9 346 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CADM2Q8N3J6 435 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 POMGNT2Q8NAT1 580 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 SCCPDHQ8NBX0 429 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 Q8NFD4 153 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 MIPOL1Q8TD10 442 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CKAP2Q8WWK9 683 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 TMEM45BQ96B21 275 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 SLC25A36Q96CQ1 311 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 ALKBH3Q96Q83 286 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-219ENST00000494323 KATNB1Q9BVA0 655 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 SF3B5Q9BWJ5 86 aaKnown RBP4.4□□□□□ -1.71
PTCD3-219ENST00000494323 MTHFD2LQ9H903 347 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-219ENST00000494323 CRLF2Q9HC73 371 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 DYNLRB1Q9NP97 96 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 HIF1ANQ9NWT6 349 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 TREM2Q9NZC2 230 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 IL36RNQ9UBH0 155 aa4.4□□□□□ -1.71
PTCD3-219ENST00000494323 ANK2Q01484 3957 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 IGHV2OR16-5A0A0B4J2B6 119 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 hCG_1809904A0A1W2PP81 198 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 A0A1W2PPE2 198 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 A0A1W2PR64 198 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 B4DSR2 109 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ITM2AO43736 263 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 IGLV1-44P01699 117 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ERCC1P07992 297 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 PRG2P13727 222 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 CBR1P16152 277 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ACAA2P42765 397 aaKnown RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ALDH3B1P43353 468 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 P2RY4P51582 365 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms