RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 FIGNL2A6NMB9 653 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 B4GALNT1Q00973 533 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 HES1Q14469 280 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 HABP2Q14520 560 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-207ENST00000494090 QPCTLQ9NXS2 382 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 CSF3P09919 207 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 OR8U8P0C7N1 319 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 PTAFRP25105 342 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 SSX2Q16385 188 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 USP51Q70EK9 711 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 OR1M1Q8NGA1 313 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 CMTM2Q8TAZ6 248 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 MRGPRX1Q96LB2 322 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 OR2A14Q96R47 310 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 C20orf202A1L168 122 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 FITM1A5D6W6 292 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 PNLIPRP2P54317 469 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 ACKR1Q16570 336 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 FAM74A1Q5RGS3 127 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 C15orf54Q8N8G6 183 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 ZNF321PQ8N8H1 164 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 HRH3Q9Y5N1 445 aa17.44■□□□□ 0.38
COL27A1-207ENST00000494090 DEFA4P12838 97 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 EPHA2P29317 976 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 HIST2H3PS2Q5TEC6 136 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 FAM122CQ6P4D5 195 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 C1orf87Q8N0U7 546 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 KDM8Q8N371 416 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 SIRT6Q8N6T7 355 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 MRGPRX4Q96LA9 322 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 NHSQ6T4R5 1651 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 RAB13P51153 203 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 CLDN20P56880 219 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 EDDM3AQ14507 147 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 CDK5R1Q15078 307 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 YRDCQ86U90 279 aaKnown RBP17.43■□□□□ 0.38
COL27A1-207ENST00000494090 FJX1Q86VR8 437 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 EXO1Q9UQ84 846 aaKnown RBP17.43■□□□□ 0.38
COL27A1-207ENST00000494090 LOXL2Q9Y4K0 774 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 PRRC2BQ5JSZ5 2229 aaKnown RBP17.43■□□□□ 0.38
COL27A1-207ENST00000494090 A0A0A6YYJ9 748 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 XRCC2O43543 280 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 TBPP20226 339 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 TBXA2RP21731 343 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 SSTP61278 116 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 TMEM81Q6P7N7 255 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 PLXDC2Q6UX71 529 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 TMEM200AQ86VY9 491 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 OR2A1Q8NGT9 310 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 MED30Q96HR3 178 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 ARV1Q9H2C2 271 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 QDPRP09417 244 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 PRTGQ2VWP7 1150 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 SOHLH1Q5JUK2 328 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 OR2AE1Q8NHA4 323 aa17.43■□□□□ 0.38
COL27A1-207ENST00000494090 NHSL1Q5SYE7 1610 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 ASPDHA6ND91 283 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 EDN3P14138 238 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 ST6GAL1P15907 406 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL27A1-207ENST00000494090 OXGR1Q96P68 337 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 FAM234AQ9H0X4 552 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 RPH3ALQ9UNE2 315 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 B3GALT5Q9Y2C3 310 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 TSTD3H0UI37 97 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 SUMO3P55854 103 aaPredicted RBP17.42■□□□□ 0.38
COL27A1-207ENST00000494090 FAM122BQ7Z309 247 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 SLAMF6Q96DU3 332 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 OCEL1Q9H607 264 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 DOCK2Q92608 1830 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 IFITM5A6NNB3 132 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 CRYAAP02489 173 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 GPR3P46089 330 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 RPL18Q07020 188 aaKnown RBP17.42■□□□□ 0.38
COL27A1-207ENST00000494090 LHFPL2Q6ZUX7 228 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 GABRG1Q8N1C3 465 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 DEFB123Q8N688 67 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 TEX101Q9BY14 249 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 PIGMQ9H3S5 423 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 ZCCHC4Q9H5U6 513 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 TMEM9BQ9NQ34 198 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 TUBG2Q9NRH3 451 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 SHISA7A6NL88 538 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 NDUFB7P17568 137 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 NFYBP25208 207 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 CLN3Q13286 438 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 KCNAB1Q14722 419 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 CTF1Q16619 201 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 OR52H1Q8NGJ2 320 aa17.42■□□□□ 0.38
COL27A1-207ENST00000494090 HLA-HP01893 362 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 NKG7Q16617 165 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 AVPI1Q5T686 147 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 H2BFWTQ7Z2G1 175 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 CMTM4Q8IZR5 234 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 ZNF784Q8NCA9 323 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-207ENST00000494090 ST7LQ8TDW4 575 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 RIMS4Q9H426 269 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-207ENST00000494090 EVPLQ92817 2033 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 A0A0A6YYD5 115 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 NRG2O14511 850 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms