RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 VWA1Q6PCB0 445 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 Q6ZSR9 355 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 C22orf34Q6ZV56 151 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 PTCHD4Q6ZW05 846 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 KRTAP1-3Q8IUG1 177 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 KLHL36Q8N4N3 616 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 NANOGP1Q8N7R0 232 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 PXT1Q8NFP0 134 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 OR2M3Q8NG83 312 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 OR10G2Q8NGC3 310 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 OR11H4Q8NGC9 324 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 OR2T35Q8NGX2 323 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 FAM222BQ8WU58 562 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 TCTEX1D2Q8WW35 142 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 ELP4Q96EB1 424 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 TEX37Q96LM6 180 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 POLR2J2Q9GZM3 115 aaKnown RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 ABCG5Q9H222 651 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 CXXC4Q9H2H0 198 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 PLEKHF2Q9H8W4 249 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 SEBOXQ9HB31 216 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 GPN1Q9HCN4 374 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 MYNNQ9NPC7 610 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 NIT2Q9NQR4 276 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 ZFP57Q9NU63 452 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 SLAMF8Q9P0V8 285 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF629Q9UEG4 869 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 C19orf53Q9UNZ5 99 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 ANK3Q12955 4377 aaKnown RBP7.27□□□□□ -1.24
HDAC6-234ENST00000493923 TRDV1A0A1B0GX56 115 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 A0A1W2PNV4 684 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 PLSCR5A0PG75 271 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 OR2M5A3KFT3 312 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 DISC1C4P0D8 188 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 PSMD9O00233 223 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 TNFRSF11BO00300 401 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 OIP5O43482 229 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ATG12O94817 140 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 RCBTB2O95199 551 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 RAB36O95755 333 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 IL18BPO95998 194 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 CFDP00746 253 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 HRGP04196 525 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 TCRBP04435 133 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 LPLP06858 475 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ACAA1P09110 424 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ACP2P11117 423 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 EPXP11678 715 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 PRPS2P11908 318 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 PRG2P13727 222 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 NFYAP23511 347 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 AHCYP23526 432 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 PTAFRP25105 342 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 IL12BP29460 328 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 GABRA5P31644 462 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 CCKARP32238 428 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 KDELR2P33947 212 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 MNDAP41218 407 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 MAP3K8P41279 467 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 RFX3P48380 749 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 PNLIPRP2P54317 469 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 RIPPLY3P57055 190 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 FAM27E3Q08E93 113 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF763Q0D2J5 394 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 TPBGQ13641 420 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 HEPACAMQ14CZ8 416 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 SSX2Q16385 188 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF474Q6S9Z5 364 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 LIAT1Q6ZQX7 453 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 FAM122BQ7Z309 247 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 OR2L13Q8N349 312 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 OR4K17Q8NGC6 315 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 DUSP19Q8WTR2 217 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF524Q96C55 264 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 STARD4Q96DR4 205 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 C16orf58Q96GQ5 468 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF845Q96IR2 970 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 UCN2Q96RP3 112 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 TSNAXQ99598 290 aaKnown RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 FOXC2Q99958 501 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 PIGQQ9BRB3 760 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 RBM24Q9BX46 236 aaKnown RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 MS4A7Q9GZW8 240 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 OPN3Q9H1Y3 402 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 SLC25A19Q9HC21 320 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 TREM2Q9NZC2 230 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 MIOXQ9UGB7 285 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 BTNL2Q9UIR0 455 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 DKKL1Q9UK85 242 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF337Q9Y3M9 751 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 SONP18583 2426 aaKnown RBP7.27□□□□□ -1.25
HDAC6-234ENST00000493923 DSCAMO60469 2012 aa7.27□□□□□ -1.25
HDAC6-234ENST00000493923 A0A087WV62 115 aa7.26□□□□□ -1.25
HDAC6-234ENST00000493923 TMEM129A0AVI4 362 aa7.26□□□□□ -1.25
HDAC6-234ENST00000493923 FAM74A7A6NL05 159 aa7.26□□□□□ -1.25
HDAC6-234ENST00000493923 ZAR1LA6NP61 321 aa7.26□□□□□ -1.25
HDAC6-234ENST00000493923 A8MXE2 369 aa7.26□□□□□ -1.25
HDAC6-234ENST00000493923 C1orf196B1AJZ1 125 aa7.26□□□□□ -1.25
HDAC6-234ENST00000493923 ENTPD6O75354 484 aa7.26□□□□□ -1.25
HDAC6-234ENST00000493923 KDM4BO94953 1096 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms