RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 MARS2Q96GW9 593 aaKnown RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 NSL1Q96IY1 281 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 C4orf45Q96LM5 186 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 SAMD8Q96LT4 415 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 POFUT1Q9H488 388 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 SLCO1C1Q9NYB5 712 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 GPR160Q9UJ42 338 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 CDC42EP3Q9UKI2 254 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 GRIP1Q9Y3R0 1128 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 CACNG2Q9Y698 323 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 ARHGAP32A7KAX9 2087 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 AHCYL1O43865 530 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 DOK2O60496 412 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 KHDRBS3O75525 346 aaKnown RBP9.08□□□□□ -0.96
COL6A3-214ENST00000493608 IGHV3-13P01766 116 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 ATP6V1B2P21281 511 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 ACHEP22303 614 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 HTR5AP47898 357 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 ZNF81P51508 661 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 RPS6KA3P51812 740 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 PPP1CBP62140 327 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 MEP1BQ16820 701 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 RFX4Q33E94 735 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 AVPI1Q5T686 147 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 LEG1Q6P5S2 330 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 SMARCD3Q6STE5 483 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 RINLQ6ZS11 566 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 OR4K13Q8NH42 304 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 CLDND2Q8NHS1 167 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 FANK1Q8TC84 345 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 GPX7Q96SL4 187 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-214ENST00000493608 IFT27Q9BW83 186 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 OR52D1Q9H346 318 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 ELOVL3Q9HB03 270 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 LPAR2Q9HBW0 351 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 IL1RAPQ9NPH3 570 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 KRCC1Q9NPI7 259 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-214ENST00000493608 DECR2Q9NUI1 292 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 VSX1Q9NZR4 365 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-214ENST00000493608 TMCC3Q9ULS5 477 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 COL6A5A8TX70 2615 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 DYSFO75923 2080 aa9.08□□□□□ -0.96
COL6A3-214ENST00000493608 RER1O15258 196 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 SGCEO43556 437 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 RP2O75695 350 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 ABHD16AO95870 558 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 TXNDC12O95881 172 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 IFNA2P01563 188 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 IGHV1-46P01743 117 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 DBHP09172 617 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 FAM157CP0CG43 387 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
COL6A3-214ENST00000493608 MMP15P51511 669 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 ARHGDIAP52565 204 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 TMEM33P57088 247 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 SRSF2Q01130 221 aaKnown RBP9.07□□□□□ -0.96
COL6A3-214ENST00000493608 MS4A2Q01362 244 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 MVKQ03426 396 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 SCRN3Q0VDG4 424 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 MOGQ16653 247 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 CR1LQ2VPA4 569 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 CCDC92Q53HC0 331 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-214ENST00000493608 SPRNQ5BIV9 151 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 SLC35F1Q5T1Q4 408 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 MBNL2Q5VZF2 373 aaKnown RBP9.07□□□□□ -0.96
COL6A3-214ENST00000493608 CORO6Q6QEF8 472 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 USP51Q70EK9 711 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 GLB1L2Q8IW92 636 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 LINC01356Q8N9X3 169 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 OR9Q2Q8NGE9 314 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 GNPDA2Q8TDQ7 276 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 NMNAT3Q96T66 252 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 FN3KQ9H479 309 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 EGLN3Q9H6Z9 239 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 MSL2Q9HCI7 577 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 TMEM160Q9NX00 188 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 NDE1Q9NXR1 346 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 PLEK2Q9NYT0 353 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 ASH2LQ9UBL3 628 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 B9D1Q9UPM9 204 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 STARD10Q9Y365 291 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 WNK2Q9Y3S1 2297 aa9.07□□□□□ -0.96
COL6A3-214ENST00000493608 IGHV1-69-2A0A0G2JMI3 117 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 TCRBV5S2A0A599 114 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 ZSCAN5BA6NJL1 495 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 FAM157AC9JC47 383 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 TNFRSF11BO00300 401 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 MT-ND5P03915 603 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 T-ENOLP0DO92 83 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 SRD5A1P18405 259 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 FPR3P25089 353 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 SLC6A6P31641 620 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 CRYBB2P43320 205 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 GSSP48637 474 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 MNAT1P51948 309 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 CDH15P55291 814 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 LSM6P62312 80 aaKnown RBP9.06□□□□□ -0.96
COL6A3-214ENST00000493608 PSG7Q13046 419 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 AQP6Q13520 282 aa9.06□□□□□ -0.96
COL6A3-214ENST00000493608 PCGF3Q3KNV8 242 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms