RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PCDHAC1Q9H158 963 aa11.82□□□□□ -0.52
PRPF40A-211ENST00000493468 NOTCH3Q9UM47 2321 aa11.82□□□□□ -0.52
PRPF40A-211ENST00000493468 TENM3Q9P273 2699 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 IGHV1-69DA0A0B4J2H0 117 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 TRAPPC13A5PLN9 417 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 J3QW42 95 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 ZNF205O95201 554 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 IGF2P01344 180 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 IGHV1-69P01742 117 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 SFTPBP07988 381 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 RAC2P15153 192 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 FUT4P22083 530 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 PSMB10P40306 273 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 SRP9P49458 86 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 CD47Q08722 323 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 VAX1Q5SQQ9 334 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 OR6T1Q8NGN1 323 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 NSMAFQ92636 917 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 DPAGT1Q9H3H5 408 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 MEPEQ9NQ76 525 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 SLC7A7Q9UM01 511 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 CORO2BQ9UQ03 480 aa11.81□□□□□ -0.52
PRPF40A-211ENST00000493468 COL7A1Q02388 2944 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 C12orf71A8MTZ7 269 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 TOX4O94842 621 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 GPX2P18283 190 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 MSR1P21757 451 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 AQP1P29972 269 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 PCBP3P57721 371 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 ENDOGQ14249 297 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 CD276Q5ZPR3 534 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 NXNQ6DKJ4 435 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 DHRS7BQ6IAN0 325 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 VASH1Q7L8A9 365 aaPredicted RBP11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 GALNT4Q8N4A0 578 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 ATG16L2Q8NAA4 619 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 SMYD1Q8NB12 490 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 OR13G1Q8NGZ3 307 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 LIPHQ8WWY8 451 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 PTP4A1Q93096 173 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 WDFY2Q96P53 400 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 TMEM109Q9BVC6 243 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 TXNIPQ9H3M7 391 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 ANGPT4Q9Y264 503 aa11.8□□□□□ -0.52
PRPF40A-211ENST00000493468 TRBV5-3A0A0A0MS03 114 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 UBDO15205 165 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 OR7A10O76100 309 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 MT-ND1P03886 318 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 AQP2P41181 271 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 GUCA1AP43080 201 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 MRPL19P49406 292 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 ERFP50548 548 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 HERPUD1Q15011 391 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 DUSP7Q16829 419 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 LYPD2Q6UXB3 125 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 TSPYL5Q86VY4 417 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 OR8G5Q8NG78 346 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 GPR32P1Q8NGA4 272 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 OR10AD1Q8NGE0 317 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 PRSS27Q9BQR3 290 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 STARD10Q9Y365 291 aa11.79□□□□□ -0.52
PRPF40A-211ENST00000493468 A0A0U1RQK1 487 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 ZNF816-ZNF321PA0A0X1KG74 233 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 A0A1B0GWJ7 208 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 GPR37O15354 613 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 DOK2O60496 412 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 SNNO75324 88 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 FUT1P19526 365 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 RBM34P42696 430 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 GATA4P43694 442 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 HTR5AP47898 357 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 EGR3Q06889 387 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 SCRN3Q0VDG4 424 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 FBXW12Q6X9E4 464 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 Q6ZTK2 550 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 MOGAT3Q86VF5 341 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 PNLDC1Q8NA58 520 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 PCYOX1LQ8NBM8 494 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 OR4D11Q8NGI4 311 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 Q8TCH9 128 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 RBP7Q96R05 134 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 IKZF5Q9H5V7 419 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 THAP1Q9NVV9 213 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 NECAP2Q9NVZ3 263 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 VAPAQ9P0L0 249 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 SLAMF8Q9P0V8 285 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 VPREB3Q9UKI3 123 aa11.78□□□□□ -0.52
PRPF40A-211ENST00000493468 MLNRO43193 412 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 TGFBR2P37173 567 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 RUNDC3AQ59EK9 446 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 RBM45Q8IUH3 476 aaKnown RBP11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 SLC30A8Q8IWU4 369 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 OR5AS1Q8N127 324 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 SCCPDHQ8NBX0 429 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms