RNA–Protein interactions for RNA: ENST00000492519.1

PABPC4-217, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-217ENST00000492519 NEIL3Q8TAT5 605 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 FANK1Q8TC84 345 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 FAM151AQ8WW52 585 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 SMARCD2Q92925 531 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 TMEM101Q96IK0 257 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 IMMP1LQ96LU5 166 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 MBOAT4Q96T53 435 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 RIOK1Q9BRS2 568 aaKnown RBP2.34□□□□□ -2.03
PABPC4-217ENST00000492519 GBA3Q9H227 469 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 TDRD3Q9H7E2 651 aaKnown RBP2.34□□□□□ -2.03
PABPC4-217ENST00000492519 SLC25A22Q9H936 323 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 CDH10Q9Y6N8 788 aa2.34□□□□□ -2.03
PABPC4-217ENST00000492519 TDRD6O60522 2096 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 SIP14410 1827 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 CDK5RAP2Q96SN8 1893 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 CELSR2Q9HCU4 2923 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 ACACAQ13085 2346 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 A0A1B0GTQ1 180 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 TEX46H3BTG2 121 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 NVLO15381 856 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 SPOPO43791 374 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 ACTL6AO96019 429 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 SERPIND1P05546 499 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 HPNP05981 417 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 CRYGBP07316 175 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 RHOXF2BP0C7M4 288 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 CCDC172P0C7W6 258 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 OR8G3PP0DMU2 310 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 HOXB8P17481 243 aaPredicted RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 CHMLP26374 656 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 HTR1EP28566 365 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 FMO3P31513 532 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 BMI1P35226 326 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 NUP62P37198 522 aaPredicted RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 VHLP40337 213 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 YAP1P46937 504 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 SLC11A1P49279 550 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 HADHBP55084 474 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 DLX1P56177 255 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 KCNJ2P63252 427 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 NRF1Q16656 503 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 ALKBH6Q3KRA9 238 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 SPANXN2Q5MJ10 180 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 FKBP1CQ5VVH2 108 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 LRRC66Q68CR7 880 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 TRIM40Q6P9F5 258 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 TMEM107Q6UX40 140 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 RNF165Q6ZSG1 346 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 BZW1Q7L1Q6 419 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PAQR7Q86WK9 346 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PRR22Q8IZ63 422 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 FGF14Q92915 247 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 MED8Q96G25 268 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 OR8B4Q96RC9 309 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 CHP1Q99653 195 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 RHOXF2Q9BQY4 288 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 TMEM246Q9BRR3 403 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PELOQ9BRX2 385 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 TMEM59Q9BXS4 323 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 MFFQ9GZY8 342 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PORCNQ9H237 461 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PRORYQ9H606 182 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 ANKRA2Q9H9E1 313 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PLGRKTQ9HBL7 147 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 ADAP2Q9NPF8 381 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 INPP5EQ9NRR6 644 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PTTG3PQ9NZH4 202 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 PDP1Q9P0J1 537 aaPredicted RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 ZMAT5Q9UDW3 170 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 MTRF1LQ9UGC7 380 aaKnown RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 ZNF256Q9Y2P7 627 aaPredicted RBP2.33□□□□□ -2.04
PABPC4-217ENST00000492519 COMMD3-BMI1R4GMX3 469 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 GTF3C1Q12789 2109 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 HIVEP1P15822 2718 aa2.33□□□□□ -2.04
PABPC4-217ENST00000492519 TICRRQ7Z2Z1 1910 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 ASXL3Q9C0F0 2248 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 ANKRD36CQ5JPF3 1778 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 A0A1B0GVY2 172 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 CCDC182A6NF36 153 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 KRTAP4-16G5E9R7 235 aaPredicted RBP2.32□□□□□ -2.04
PABPC4-217ENST00000492519 CCL21O00585 134 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 POLR3GO15318 223 aaPredicted RBP2.32□□□□□ -2.04
PABPC4-217ENST00000492519 NPIPB7O75200 414 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 TNFSF13O75888 250 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 IGHV2-5P01817 119 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 FGF1P05230 155 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 CHTF8P0CG12 524 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 TROVE2P10155 538 aaKnown RBP eCLIP2.32□□□□□ -2.04
PABPC4-217ENST00000492519 ICAM2P13598 275 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 ATP5C1P36542 298 aaKnown RBP2.32□□□□□ -2.04
PABPC4-217ENST00000492519 HSD17B2P37059 387 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 C21orf59P57076 290 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 FKBP1AP62942 108 aaKnown RBP2.32□□□□□ -2.04
PABPC4-217ENST00000492519 ERVK-25P63136 954 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 GPNMBQ14956 572 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 TGFBIQ15582 683 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 HSP90B2PQ58FF3 399 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 FBXO48Q5FWF7 155 aa2.32□□□□□ -2.04
PABPC4-217ENST00000492519 CASC10Q5T4H9 136 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms