RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ARL9Q6T311 187 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 LYPD4Q6UWN0 246 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZNF101Q8IZC7 436 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OR1J1Q8NGS3 322 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 C4orf45Q96LM5 186 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 Q96MF0 132 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 DOK1Q99704 481 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 COQ7Q99807 217 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SYT3Q9BQG1 590 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ELOVL3Q9HB03 270 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 S100A14Q9HCY8 104 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CYB5R1Q9UHQ9 305 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ENOPH1Q9UHY7 261 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 FZR1Q9UM11 496 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 COMMD3-BMI1R4GMX3 469 aa14□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ICMTO60725 284 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ENTPD1P49961 510 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 NUDT6P53370 316 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PPP2R2BQ00005 443 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZSCAN26Q16670 478 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 LINC01590Q5TEZ4 76 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PLBD1Q6P4A8 553 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CFAP77Q6ZQR2 320 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RFPL4BQ6ZWI9 263 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 LRP11Q86VZ4 500 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 C1orf174Q8IYL3 243 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZNF511Q8NB15 262 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ABHD4Q8TB40 342 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PTP4A1Q93096 173 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CIB1Q99828 191 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 VRK1Q99986 396 aaPredicted RBP13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RBM4BQ9BQ04 359 aaKnown RBP13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OSBPL10Q9BXB5 764 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PRRG3Q9BZD7 231 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 OR51V1Q9H2C8 321 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 WDR76Q9H967 626 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 DYNLRB1Q9NP97 96 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 HINT3Q9NQE9 182 aaKnown RBP13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TVP23BQ9NYZ1 205 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MYEF2Q9P2K5 600 aaKnown RBP13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 DUSP13Q9UII6 198 aa13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TMEFF2Q9UIK5 374 aaPredicted RBP13.99□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZAR1LA6NP61 321 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GLCEO94923 617 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZNF250P15622 560 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RPS27P42677 84 aaKnown RBP13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 KLF3P57682 345 aaPredicted RBP13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SELENOVP59797 346 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SNAPC1Q16533 368 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TMEM154Q6P9G4 183 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CPOQ8IVL8 374 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SYNPRQ8TBG9 265 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SLC7A6Q92536 515 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SORCS2Q96PQ0 1159 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 DCLRE1CQ96SD1 692 aaKnown RBP13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PITX2Q99697 317 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TBCCD1Q9NVR7 557 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GRIP1Q9Y3R0 1128 aa13.98□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 IGLV3-9A0A075B6K5 115 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPW3 197 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 M0R233 179 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZNF593O00488 134 aaPredicted RBP13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SSX4O60224 188 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 NGFP01138 241 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 DBHP09172 617 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SPARCP09486 303 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PSKH1P11801 424 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GSTT1P30711 240 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 EFNA4P52798 201 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PPP1CBP62140 327 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ECH1Q13011 328 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PCK2Q16822 640 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CLEC12BQ2HXU8 276 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ZNF718Q3SXZ3 478 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 TEX30Q5JUR7 227 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SPATA46Q5T0L3 261 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SLX4IPQ5VYV7 408 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CXXC5Q7LFL8 322 aaKnown RBP13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 SLC25A40Q8TBP6 338 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 STMN2Q93045 179 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MAP6Q96JE9 813 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 INTS14Q96SY0 518 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ATF6BQ99941 703 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GABARAPL3Q9BY60 117 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RAB1BQ9H0U4 201 aa13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PNRC2Q9NPJ4 139 aaKnown RBP13.97□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 H3BSA7 217 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 EI24O14681 340 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 PRODHO43272 600 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CLPTM1O96005 669 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 F12P00748 615 aaPredicted RBP13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ERCC1P07992 297 aaPredicted RBP13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ADRA2AP08913 450 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 CD99P14209 185 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 EPHA2P29317 976 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 GCH1P30793 250 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 ALDH3B1P43353 468 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 RGS6P49758 472 aa13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 MAD2L1BPQ15013 274 aaPredicted RBP13.96□□□□□ -0.17
MSH5-SAPCD1-206ENST00000491552 KLHL12Q53G59 568 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms