RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 ERFP50548 548 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 PSME3P61289 254 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 GPR139Q6DWJ6 353 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 C1orf94Q6P1W5 598 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 Q6ZR03 302 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 USP43Q70EL4 1123 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 OR2Z1Q8NG97 314 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 NANPQ8TBE9 248 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 ITLN1Q8WWA0 313 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 CMBLQ96DG6 245 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 C7orf69Q9H7B7 122 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 NRIP3Q9NQ35 241 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 VSX1Q9NZR4 365 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-211ENST00000491233 NDUFAF4Q9P032 175 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 EGFL7Q9UHF1 273 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 COA3Q9Y2R0 106 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-211ENST00000491233 POLR1DQ9Y2S0 133 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 STARD10Q9Y365 291 aa11.52□□□□□ -0.57
COL6A3-211ENST00000491233 FAM32AQ9Y421 112 aaKnown RBP11.52□□□□□ -0.57
COL6A3-211ENST00000491233 TRBV4-1A0A0J9YWV2 114 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 A0A1W2PRQ8 180 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 OR6C6A6NF89 314 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 TRIM77I1YAP6 450 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 PTP4A3O75365 173 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 FOXH1O75593 365 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 DIRAS1O95057 198 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 FSHBP01225 129 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 SBK2P0C263 348 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 RHCEP18577 417 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 TNFRSF1AP19438 455 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 TUBG1P23258 451 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 OMPP47874 163 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 FXYD6P3P58550 94 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 LSM6P62312 80 aaKnown RBP11.51□□□□□ -0.57
COL6A3-211ENST00000491233 DGCR6Q14129 220 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 SEC23BQ15437 767 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 CCDC92Q53HC0 331 aaPredicted RBP11.51□□□□□ -0.57
COL6A3-211ENST00000491233 PTCHD4Q6ZW05 846 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 ADCK1Q86TW2 530 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 GLB1L2Q8IW92 636 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 BPIFB2Q8N4F0 458 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 SPICQ8N5J4 248 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 ZNF283Q8N7M2 679 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 FAM86B1Q8N7N1 296 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 FAM216AQ8WUB2 273 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 RBM4Q9BWF3 364 aaKnown RBP11.51□□□□□ -0.57
COL6A3-211ENST00000491233 SUCNR1Q9BXA5 334 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 NUAK2Q9H093 628 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 TUBG2Q9NRH3 451 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 PTTG3PQ9NZH4 202 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 OPN4Q9UHM6 478 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 AURKCQ9UQB9 309 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 IER3IP1Q9Y5U9 82 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 V9GYQ6 96 aa11.51□□□□□ -0.57
COL6A3-211ENST00000491233 UNC119BA6NIH7 251 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 RER1O15258 196 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 GPANK1O95872 356 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 DBHP09172 617 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 ZFP36P26651 326 aaKnown RBP11.5□□□□□ -0.57
COL6A3-211ENST00000491233 BTG1P62324 171 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 TMEM155Q4W5P6 130 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 GLYATQ6IB77 296 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 DPY19L2P2Q6ZN68 376 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-211ENST00000491233 OR5AS1Q8N127 324 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 KLHL36Q8N4N3 616 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 FANK1Q8TC84 345 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 HAVCR1Q96D42 359 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 SAMD8Q96LT4 415 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 COG8Q96MW5 612 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 OR2V2Q96R30 315 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 SIGLEC11Q96RL6 698 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 PATZ1Q9HBE1 687 aaKnown RBP11.5□□□□□ -0.57
COL6A3-211ENST00000491233 KRCC1Q9NPI7 259 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-211ENST00000491233 ATPIF1Q9UII2 106 aa11.5□□□□□ -0.57
COL6A3-211ENST00000491233 SAMD4AQ9UPU9 718 aaKnown RBP11.5□□□□□ -0.57
COL6A3-211ENST00000491233 PPIAL4EA0A075B759 164 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 PPIAL4CA0A0B4J2A2 164 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 PPIAL4DF5H284 164 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 J3QW42 95 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 SURF4O15260 269 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 TXNDC12O95881 172 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 PPIAL4FP0DN26 164 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 CDKN2AP42771 156 aaKnown RBP11.49□□□□□ -0.57
COL6A3-211ENST00000491233 CENPAP49450 140 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 MMP16P51512 607 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 RPS6KA3P51812 740 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 SEC61A1P61619 476 aaKnown RBP11.49□□□□□ -0.57
COL6A3-211ENST00000491233 HLXQ14774 488 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-211ENST00000491233 ZMYND11Q15326 602 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 KCNMB1Q16558 191 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 MEP1BQ16820 701 aa11.49□□□□□ -0.57
COL6A3-211ENST00000491233 DNM1P34Q6PK57 102 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms