RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 SYT9Q86SS6 491 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 PATL1Q86TB9 770 aaKnown RBP11.64□□□□□ -0.55
VARS-227ENST00000489979 SLC30A8Q8IWU4 369 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 OR10AD1Q8NGE0 317 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 OR8B3Q8NGG8 313 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 SLC26A7Q8TE54 656 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 TMEM239Q8WW34 195 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 LIPHQ8WWY8 451 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 FAM71F1Q96KD3 344 aaPredicted RBP11.64□□□□□ -0.55
VARS-227ENST00000489979 MEGF10Q96KG7 1140 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 OR8B2Q96RD0 313 aa11.64□□□□□ -0.55
VARS-227ENST00000489979 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 SLC22A31A6NKX4 558 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 C12orf71A8MTZ7 269 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 DOK2O60496 412 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 TSPAN15O95858 294 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 IGF2P01344 180 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 COX5BP10606 129 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 TAS2R41P59536 307 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 RPL27P61353 136 aaKnown RBP11.63□□□□□ -0.55
VARS-227ENST00000489979 GUCY1A3Q02108 690 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 PDCD1Q15116 288 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 ZNF404Q494X3 552 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 ALG10Q5BKT4 473 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 TTMPQ5BVD1 217 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 FAM201AQ5SY85 155 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 C1orf94Q6P1W5 598 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 NLRC3Q7RTR2 1065 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 FAM110DQ8TAY7 271 aaPredicted RBP11.63□□□□□ -0.55
VARS-227ENST00000489979 FNDC8Q8TC99 324 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 PTP4A1Q93096 173 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 MAGEB18Q96M61 343 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 EBF4Q9BQW3 602 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 CDADC1Q9BWV3 514 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 EMC7Q9NPA0 242 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 POLE4Q9NR33 117 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
VARS-227ENST00000489979 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.63□□□□□ -0.55
VARS-227ENST00000489979 V9GYY5 206 aaPredicted RBP11.63□□□□□ -0.55
VARS-227ENST00000489979 CLPXO76031 633 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 TNFRSF1BP20333 461 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 IDH3AP50213 366 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 CTXN1P60606 82 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 FBLN7Q53RD9 439 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 WDR25Q64LD2 544 aaPredicted RBP11.62□□□□□ -0.55
VARS-227ENST00000489979 DHDDSQ86SQ9 333 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 IGFN1Q86VF2 1251 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 MOGAT3Q86VF5 341 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 C10orf82Q8WW14 230 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 SLC7A6Q92536 515 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 PCGF1Q9BSM1 259 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 NKIRAS1Q9NYS0 192 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 ASH2LQ9UBL3 628 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 RIMS3Q9UJD0 308 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 HIF3AQ9Y2N7 669 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 SH3GLB1Q9Y371 365 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 MED31Q9Y3C7 131 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 POMT1Q9Y6A1 747 aa11.62□□□□□ -0.55
VARS-227ENST00000489979 C22orf46C9J442 243 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 H0YL77 283 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 TNFRSF13BO14836 293 aaPredicted RBP11.61□□□□□ -0.55
VARS-227ENST00000489979 SGCEO43556 437 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 PIP5K1CO60331 668 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 SHOX2O60902 331 aaPredicted RBP11.61□□□□□ -0.55
VARS-227ENST00000489979 OR5F1O95221 314 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 SFTPBP07988 381 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 RAC2P15153 192 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 PMELP40967 661 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 SRP9P49458 86 aaKnown RBP11.61□□□□□ -0.55
VARS-227ENST00000489979 CRYBA2P53672 197 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 SLC18A1P54219 525 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 PROK1P58294 105 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 SCRN3Q0VDG4 424 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 PIN1Q13526 163 aaPredicted RBP11.61□□□□□ -0.55
VARS-227ENST00000489979 OR2T2Q6IF00 324 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 LYPD2Q6UXB3 125 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 VASH1Q7L8A9 365 aaPredicted RBP11.61□□□□□ -0.55
VARS-227ENST00000489979 CROCCP2Q86T23 111 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 OR8G5Q8NG78 346 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 OR13G1Q8NGZ3 307 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 TBC1D15Q8TC07 691 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 SSMEM1Q8WWF3 244 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 RASSF5Q8WWW0 418 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 DYRK2Q92630 601 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 COG8Q96MW5 612 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 CGREF1Q99674 301 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 WACQ9BTA9 647 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 CCDC28BQ9BUN5 200 aa11.61□□□□□ -0.55
VARS-227ENST00000489979 KAT8Q9H7Z6 458 aaKnown RBP11.61□□□□□ -0.55
VARS-227ENST00000489979 LRRC30A6NM36 301 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 F5H5P2 479 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 H7C1C5 153 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 P2RY10O00398 339 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 PHYHO14832 338 aa11.6□□□□□ -0.55
VARS-227ENST00000489979 ENSAO43768 121 aaKnown RBP11.6□□□□□ -0.55
VARS-227ENST00000489979 GPR137BO60478 399 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms